# positions[].organizations[].parent[].label
Texas A&M Engineering Experiment Station (TEES)

# overview
My research focuses on adaptive control, parametric robust control, and genomic signal processing and control.

# keywords[]
3102 Bioinformatics And Computational Biology

# keywords[]
4007 Control Engineering, Mechatronics And Robotics

# keywords[]
Intercellular Signaling Peptides And Proteins

# keywords[]
Networking And Information Technology R&d

# keywords[]
4603 Computer Vision And Multimedia Computation

# keywords[]
4007 Control Engineering, Mechatronics And Robotics

# keywords[]
5 Development Of Treatments And Therapeutic Interventions

# keywords[]
1.1 Normal Biological Development And Functioning

# keywords[]
4007 Control Engineering, Mechatronics And Robotics

# keywords[]
4007 Control Engineering, Mechatronics And Robotics

# keywords[]
Optimal Control Of Probabilistic Boolean Networks

# keywords[]
Clinical Trials And Supportive Activities

# keywords[]
4007 Control Engineering, Mechatronics And Robotics

# keywords[]
5 Development Of Treatments And Therapeutic Interventions

# keywords[]
4007 Control Engineering, Mechatronics And Robotics

# keywords[]
3102 Bioinformatics And Computational Biology

# keywords[]
1.1 Normal Biological Development And Functioning

# keywords[]
3102 Bioinformatics And Computational Biology

# keywords[]
4603 Computer Vision And Multimedia Computation

# keywords[]
4007 Control Engineering, Mechatronics And Robotics

# keywords[]
4007 Control Engineering, Mechatronics And Robotics

# keywords[]
5 Development Of Treatments And Therapeutic Interventions

# keywords[]
4007 Control Engineering, Mechatronics And Robotics

# educationAndTraining[].organization.label
University of Southern California - (Los Angeles, California, United States)

# educationAndTraining[].organization.label
University of Southern California - (Los Angeles, California, United States)

# educationAndTraining[].organization.label
Southern Illinois University Carbondale - (Carbondale, Illinois, United States)

# educationAndTraining[].organization.label
Indian Institute of Technology Kharagpur - (Kharagpur, India)

# awardsAndHonors[].label
J. W. Runyon, Jr. '35 Endowed Professorship

# publications[].label
ON MODIFYING MODEL-REFERENCE ADAPTIVE-CONTROL SCHEMES FOR PERFORMANCE IMPROVEMENT

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Using the message passing algorithm on discrete data to detect faults in boolean regulatory networks

# publications[].label
Model-free fuzzy intervention in biological phenomena

# publications[].publisher
Hamad bin Khalifa University Press (HBKU Press)

# publications[].label
Design of a decentralized detection filter for a class of interconnected systems

# publications[].label
Robust intervention in Probabilistic Boolean Networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
ON MODIFYING MODEL-REFERENCE ADAPTIVE-CONTROL SCHEMES FOR PERFORMANCE IMPROVEMENT

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Optimal intervention in semi-Markov-based asynchronous genetic regulatory networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Which control gene should be used in genetic regulatory networks?

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Boolean Network Model of Oxidative Stress Response Pathways

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Optimal constrained stationary intervention in gene regulatory networks.

# publications[].label
ROBUSTNESS OF DISCRETE-TIME ADAPTIVE CONTROLLERS - AN INPUT-OUTPUT APPROACH

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
A Measurement-Based Approach for Designing Fixed-Order Controllers for Unknown Closed-Loop Architecture

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
A Survey of Software and Hardware Approaches to Performing Read Alignment in Next Generation Sequencing.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Intervention in probabilistic gene regulatory networks

# publications[].label
ON A QUANTITATIVE THEORY OF ROBUST ADAPTIVE-CONTROL - AN INTERVAL PLANT APPROACH

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Intervention in a family of Boolean networks.

# publications[].label
An elementary derivation of the Routh-Hurwitz criterion

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Robust control design using the PID controller

# publications[].label
Targeting Oncogenic Mutations in Colorectal Cancer using Cryptotanshinone

# publications[].label
A GPU-CPU heterogeneous algorithm for NGS read alignment

# publications[].label
Linear Control Theory Structure, Robustness, and Optimization PREFACE

# publications[].label
Detecting Drought Regulators using Stochastic Inference in Bayesian Networks

# publications[].label
Optimal control in a family of Boolean networks

# publications[].label
Determining the relative prevalence of different subpopulations in heterogeneous cancer tissue

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Computational and statistical approaches for modeling of proteomic and genomic networks.

# publications[].label
Network modeling and inference of peroxisome proliferator-activated receptor pathway in high fat diet-linked obesity.

# publications[].label
In Silico Modeling of the Induction of Apoptosis by Cryptotanshinone in Osteosarcoma Cell Lines.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Boolean relationships among genes responsive to ionizing radiation in the NCI 60 ACDS.

# publications[].label
Design of a decentralized detection filter for a large collection of interacting LTI systems

# publications[].label
Adaptive Model Algorithmic Control11This work was supported in part by the National Science Foundation under Grant No. ECS-9903488 and in part by the Texas Advanced Technology Program under Grant No. 0005120099-1999.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].id
H optimization for stable plants

# publications[].label
Intervention in genetic disease using signal processing

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Robust adaptive control: Design, analysis and robustness bounds

# publications[].label
Multiscale denoising of biological data: A comparative analysis

# publications[].publisher
Hamad bin Khalifa University Press (HBKU Press)

# publications[].label
PID CONTROLLERS FOR SYSTEMS WITH TIME DELAY

# publications[].label
A nonparametric approach to design robust controllers for uncertain systems: Application to an air flow heating system

# publications[].label
INTERVENTION IN BIOLOGICAL PHENOMENA REPRESENTED BY GENETIC REGULATORY NETWORKS: A VARIABLE STRUCTURE APPROACH

# publications[].label
Multiscale denoising of biological data: a comparative analysis.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Epifluorescent imaging study of the effect of anti-diabetic drug metformin on colorectal cancer cell lines in vitro

# publications[].label
A Gaussian Mixture-Model Exploiting Pathway Knowledge for Dissecting Cancer Heterogeneity.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Feedback stabilization of discrete-time systems via the generalized Hermite-Biehler theorem

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Modelling Oxidative Stress Response Pathways

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Partially decentralized adaptive control of interconnected systems with improved performance

# publications[].label
In Silico Design and Experimental Validation of Combination Therapy for Pancreatic Cancer.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
PID tuning revisited: Guaranteed stability and non-fragility

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Modeling Hypoxia Stress Response Pathways

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Understanding the Bioinformatics Challenges of Integrating Genomics into Healthcare.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
An in-silico study examining the induction of apoptosis by Cryptotanshinone in metastatic melanoma cell lines.

# publications[].label
Drug Target Identification in Triple Negative Breast Cancer Stem Cell Pathways: A Computational Study of Gene Regulatory Pathways Using Boolean Networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Robust and optimal PID controller design

# publications[].label
Robust Recurrent CNV Detection in the Presence of Inter-Subject Variability.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Fused Graphical Lasso Recovers Flowering Time Mutation Genes in Arabidopsis thaliana

# publications[].label
A Bayesian Approach to Determine the Composition of Heterogeneous Cancer Tissue

# publications[].publisher
Association for Computing Machinery (ACM)

# publications[].label
Integration of data analytics with cloud services for safer process systems, application examples and implementation challenges

# publications[].label
Stabilization of first-order systems with time delay using the PID controller

# publications[].label
Decentralized indirect adaptive control of interconnected systems

# publications[].label
Modeling cyclic therapy in gene regulatory networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Robust intervention in Probabilistic Boolean networks

# publications[].label
Adaptive internal model control: The discrete-time case

# publications[].label
Towards targeted combinatorial therapy design for the treatment of castration-resistant prostate cancer.

# publications[].label
Drug target ranking for glioblastoma multiforme.

# publications[].label
New results on the synthesis of PID controllers

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Model-Free Controller Tuning Based on DFT Processing: Application to Induction Motor Drives

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Detecting Drought Regulators using Stochastic Inference in Bayesian Networks

# publications[].label
Recent advances in intervention in markovian regulatory networks.

# publications[].label
Optimal Intervention Strategies for Cyclic Therapeutic Methods with Fixed-Length Duration of Effect

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Targeting oncogenic mutations in colorectal cancer using cryptotanshinone.

# publications[].label
Adaptive Intervention in Probabilistic Boolean Networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
A DATA-BASED APPROACH FOR DESIGNING ADAPTIVE CONTROLLERS FOR UNKNOWN SYSTEMS

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Fast and Efficient Genotype Encoding Using Sparse 2D Bitmaps for Database-Driven Genomics Applications

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Robust Control Design Using the PID Controller11This work was supported in part by the National Science Foundation under Grant No. ECS-9903488, in part by the Texas Advanced Technology Program under Grant No. 000512-0099-1999, and in part by the National Cancer Institute under Grant No. CA 90301.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Output-Feedback Model Predictive Control of Biological Phenomena Modeled by S-Systems

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
DIRECTLY COMPUTABLE L(2) AND L-INFINITY PERFORMANCE BOUNDS FOR MORSES DYNAMIC CERTAINTY EQUIVALENCE ADAPTIVE CONTROLLER

# publications[].label
On The Modeling of Heterogeneity in Cancer Tissue

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Robust control design method for uncertain system using a set of measurements

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Towards targeted combinatorial therapy design for the treatment of castration-resistant prostate cancer

# publications[].publisher
Association for Computing Machinery (ACM)

# publications[].label
PID stabilization of LTI plants with time-delay

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Determination of Stabilizing Feedback Gains for Second-order Systems with Time Delay11This work was supported in part by the National Science Foundation under Grant No. ECS-9903488 and in part by the Texas Advanced Technology Program under Grant No. 0005120099-1999

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Performance improvement in decentralized adaptive control: a modified model reference scheme

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Emergence of DSS efforts in genomics: Past contributions and challenges

# publications[].label
On reinforcement learning in genetic regulatory networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
On a quantitative theory of robust adaptive control: An interval plant approach

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Assignment of terminal penalties in controlling genetic regulatory networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Bayesian Inference Identifies Combination Therapeutic Targets in Breast Cancer.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Time Optimal Data Harvesting in Two Dimensions through Reinforcement Learning Without Engineered Reward Functions

# publications[].id
H2 optimization for stable plants

# publications[].label
PI stabilization of first-order systems with time delay

# publications[].label
TRANSIENT PERFORMANCE IMPROVEMENT IN CONTINUOUS-TIME MODEL-REFERENCE ADAPTIVE-CONTROL - AN L1 FORMULATION

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
PID CONTROLLERS FOR DELAY-FREE LTI SYSTEMS

# publications[].label
Intervention in gene regulatory networks via a stationary mean-first-passage-time control policy.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Computation of all stabilizing PID gains for digital control systems

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
External control in Markovian Genetic Regulatory Networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
HiMMe: using genetic patterns as a proxy for genome assembly reliability assessment.

# publications[].label
Tissue specific expression of UMAMIT amino acid transporters in wheat.

# publications[].label
Determination of stabilizing feedback gains for second-order systems with time delay

# publications[].label
Application of Big Data analytics in process safety and risk management

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
PERFORMANCE IMPROVEMENT VERSUS ROBUST STABILITY IN MODEL-REFERENCE ADAPTIVE-CONTROL

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
External control in a special class of Probabilistic Boolean Networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Comparative non-cholinergic neurotoxic effects of paraoxon and diisopropyl fluorophosphate (DFP) on human neuroblastoma and astrocytoma cell lines.

# publications[].label
Simulating variance heterogeneity in quantitative genome wide association studies.

# publications[].label
Adaptive intervention in probabilistic boolean networks.

# publications[].label
A measurement-based control design approach for efficient cancer chemotherapy

# publications[].label
Image Processing Pipeline to Compute Homologous Recombination Score

# publications[].publisher
Association for Computing Machinery (ACM)

# publications[].label
Detecting cell growth and drug response in heterogeneous populations: A dynamic imaging approach

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Decentralized indirect adaptive control of interconnected systems

# publications[].label
A modified model reference adaptive control scheme for rigid robots

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Mean first-passage time control policy versus reinforcement-learning control policy in gene regulatory networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
External control in Markovian genetic regulatory networks: the imperfect information case.

# publications[].label
ADAPTIVE CONTROLLER DESIGN FOR UNKNOWN SYSTEMS USING MEASURED DATA

# publications[].label
Measurement-based control approach for tuning PID controllers: application to induction machines

# publications[].label
Optimal Intervention Strategies for Therapeutic Methods With Fixed-Length Duration of Drug Effectiveness

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Combination Therapy Design for Cancer: A Digital Systems Approach

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
PED stabilization of LTI plants with time-delay

# publications[].label
Computation of all stabilizing PID gains for digital control systems

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Stationary and structural control in gene regulatory networks: basic concepts

# publications[].label
A GPU-CPU heterogeneous algorithm for NGS read alignment

# publications[].label
Linear circuits: a measurement-based approach

# publications[].label
Parameter Estimation of Biological Phenomena Modeled by S-systems: An Extended Kalman Filter Approach

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Constant gain stabilization with a specified damping ratio and damped natural frequency

# publications[].label
Optimal intervention strategies for cyclic therapeutic methods.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
A model-free technique for designing fixed-order controllers

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Adaptive internal model control: the discretetime case

# publications[].label
Robust Intervention in Probabilistic Boolean Networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
A Measurement based Approach to Circuit Design

# publications[].label
Bayesian modeling of plant drought resistance pathway.

# publications[].label
Design of a Decentralized Detection Filter for a Class of Interconnected Systems

# publications[].label
State and parameter estimation for nonlinear biological phenomena modeled by S-systems

# publications[].label
Parameter estimation of biological phenomena: an unscented Kalman filter approach.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
The theory and design of adaptive internal model control schemes

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
DISCRETE-TIME ROBUST ADAPTIVE-CONTROL USING THE LYAPUNOV-SPR APPROACH

# publications[].label
Robustness analysis of commonly used adaptive control structures

# publications[].label
Robust intervention in probabilistic Boolean networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Using Boolean Logic Modeling of Gene Regulatory Networks to Exploit the Links Between Cancer and Metabolism for Therapeutic Purposes.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
PERFORMANCE IMPROVEMENT IN DECENTRALIZED ADAPTIVE-CONTROL - A MODIFIED-MODEL REFERENCE SCHEME

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
A linear programming characterization of all stabilizing PID controllers

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Directly computable L(2) and L(x) performance bounds for Morse's dynamic certainty equivalence adaptive controller

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Optimal Intervention in Asynchronous Genetic Regulatory Networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Cancer therapy design based on pathway logic.

# publications[].label
Constrained intervention in a cancerous mammalian cell cycle network

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
A Measurement Based Approach to Mechanical Systems

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Robust and non-fragile PID controller design

# publications[].label
Intervention in biological phenomena modeled by S-systems.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Modeling of Nonlinear Biological Phenomena Modeled by S-systems Using Bayesian Method

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
A generalization of the Hermite-Biehler Theorem

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
From biological pathways to regulatory networks.

# publications[].label
Transcriptome Analysis of Developing Grains from Wheat Cultivars TAM 111 and TAM 112 Reveal Cultivar-Specific Regulatory Networks.

# publications[].label
CONTROLLER SYNTHESIS FREE OF ANALYTICAL MODELS

# publications[].label
Adaptive internal model control design and stability analysis

# publications[].label
Exploiting the Cancer and Diabetes Metabolic Connection for Therapeutic Purposes

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Grand challenges in interfacing engineering with life sciences and medicine.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Industrial alarm systems: Challenges and opportunities

# publications[].label
Application of dynamic programming in genetic regulatory networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Integrative Network Modeling Highlights the Crucial Roles of Rho-GDI Signaling Pathway in the Progression of non-Small Cell Lung Cancer.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
An extension of the generalized Hermite-Biehler Theorem: Relaxation of earlier assumptions

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
On approximate stochastic control in genetic regulatory networks.

# publications[].publisher
Institution of Engineering and Technology (IET)

# publications[].label
QUANTIFICATION OF DATA EXTRACTION NOISE IN PROBABILISTIC BOOLEAN NETWORK MODELING

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Modeling of nonlinear biological phenomena modeled by S-systems.

# publications[].label
Genomic signal processing: Diagnosis and therapy

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
On determining the delta and theta Hurwitz stability of interval polynomials

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Bayesian Network Analysis of Lysine Biosynthesis Pathway in Rice

# publications[].label
PERFORMANCE ANALYSIS AND IMPROVEMENT IN MODEL-REFERENCE ADAPTIVE-CONTROL

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Optimal Therapeutic Methods with Random-Length Response in Probabilistic Boolean Networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
A new approach to feedback stabilization

# publications[].label
Real and complex stabilization: stability and performance

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Comprehensive live-cell imaging analysis of cryptotanshinone and synergistic drug-screening effects in various human and canine cancer cell lines.

# publications[].label
Generating Boolean networks with a prescribed attractor structure.

# publications[].label
Controller design via pade approximation can lead to instability

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
A Measurement-based approach for tuning of reduced-order controllers

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Adaptive Internal Model Control: H2 Optimization for Stable Plants

# publications[].label
Design of P, PI and PID controllers for interval plants

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Optimal Intervention in Markovian Gene Regulatory Networks With Random-Length Therapeutic Response to Antitumor Drug.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
External control in Markovian Genetic Regulatory Networks

# publications[].label
Intervention in Biological Phenomena Modeled by S-Systems: A Model Predictive Control Approach

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Wavelet-based Multiscale Filtering of Genomic Data

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Adaptive internal model control: the discrete-time case

# publications[].label
ON THE TRANSIENT BEHAVIOUR IN DISCRETE-TIME MODEL REFERENCE ADAPTIVE CONTROL

# publications[].label
PID Controllers for Time-Delay Systems - [Book Review]

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Optimal infinite-horizon control for probabilistic Boolean networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Real and complex stabilization: Stability and performance

# publications[].label
Synthesizing Boolean networks with a given attractor structure

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
A Measurement Based Approach for Linear Circuit Modeling and Design

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Generalizations of the Hermite-Biehler theorem: the complex case

# publications[].label
Design of reduced-order controllers using a set of measurements: Application to a DC servomotor

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Examining De Novo Transcriptome Assemblies via a Quality Assessment Pipeline.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
On The Modeling of Heterogeneity in Cancer Tissue

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
A model for cancer tissue heterogeneity.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
A Bayesian approach to determine the composition of heterogeneous cancer tissue.

# publications[].label
OPTIMAL CANCER THERAPY BASED ON A TUMOR GROWTH INHIBITION MODEL

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Modified model reference adaptive control: Design, analysis and performance bounds

# publications[].label
A measurement-based technique for designing fixed-order RST controllers and application to a coupled water tank system

# publications[].label
Hypoxia Stress Response Pathways: Modeling and Targeted Therapy.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Generalizations of the Hermite-Biehler theorem

# publications[].label
Decentralized adaptive internal model control for multi-input multi-output systems

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
A Bayesian Network-Based Approach to Selection of Intervention Points in the Mitogen-Activated Protein Kinase Plant Defense Response Pathway.

# publications[].label
Intervention in Biological Phenomena via Feedback Linearization.

# publications[].label
Cryptotanshinone Induces Cell Death in Lung Cancer by Targeting Aberrant Feedback Loops.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
De novo Transcriptome Assemblies and Annotation for Pacific Whiteleg Shrimp

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Detecting drought regulators using stochastic inference in Bayesian networks.

# publications[].label
Robustness of intervention strategies for probabilistic Boolean networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Simulating Variance Heterogeneity in Quantitative Genome Wide Association Studies

# publications[].publisher
Association for Computing Machinery (ACM)

# publications[].label
A data-driven alarm and event management framework

# publications[].label
Robustness of discrete-time adaptive controllers: An input-output approach

# publications[].label
Comprehensive Live-cell Imaging Analysis of Cryptotanshinone and Synergistic Drug-Screening Effects in Various Human and Canine Cancer Cell Lines

# publications[].label
PID CONTROLLERS: AN OVERVIEW OF CLASSICAL THEORY

# publications[].label
ON THE TRANSIENT-BEHAVIOR IN DISCRETE-TIME MODEL-REFERENCE ADAPTIVE-CONTROL - ANALYSIS AND POSSIBLE IMPROVEMENT

# publications[].label
Design of a decentralized detection of interacting LTI systems

# publications[].label
Linear Control Theory: Structure, Robustness, and Optimization

# publications[].label
Boolean modeling and fault diagnosis in oxidative stress response.

# publications[].label
Bayesian Robustness in the Control of Gene Regulatory Networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Linear Circuits: A Measurement Based Approach

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Robust adaptive control: a unified approach

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
A Conjugate Exponential Model for Cancer Tissue Heterogeneity.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Network Modeling and Inference of Peroxisome Proliferator-Activated Receptor Pathway in High fat diet-linked Obesity

# publications[].label
FAULT DETECTION AND INTERVENTION IN BIOLOGICAL FEEDBACK NETWORKS

# publications[].label
Bayesian robustness in the control of gene regulatory networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
A Measurement-Based Approach for Speed Control of Induction Machines

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Comparison of robust strategies for the control of gene regulatory networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Stabilization of First-order Systems with Time Delay using the PID controller11This work was supported in part by the National Science Foundation under Grant No. ECS-9903488 and in part by the Texas Advanced Technology Program under Grant No. 000512-0099-1999

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
From Biological Pathways to Regulatory Networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Optimal Control in a Family of Boolean Networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
A model-free design of reduced-order controllers and application to a DC servomotor

# publications[].label
Control approaches for probabilistic gene regulatory networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
A control design method for unknown systems using frequency domain data

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Modeling Cyclic and Acyclic Therapeutic Methods with Persistent Intervention Effect in Probabilistic Boolean Networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
On the stability and controller robustness of some popular PID tuning rules

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
OPEN-LOOP FEEDBACK INTERVENTION: CONTROL OF GENE REGULATORY NETWORKS WITH UNMEASURABLE CONTEXT

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Boolean Model to Experimental Validation: A Preliminary Attempt

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Plant-robust and controller-robust discrete-time PID design

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
COMPUTED TORQUE ADAPTIVE-CONTROL OF RIGID ROBOTS WITH IMPROVED TRANSIENT PERFORMANCE

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
A NEW MEASUREMENT BASED APPROACH TO THE STUDY OF BIOLOGICAL SYSTEMS

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
DATA DRIVEN SYNTHESIS OF THREE TERM DIGITAL CONTROLLERS

# publications[].label
Control system design using low order controllers: Constant gain, PI and PID

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Optimal infinite horizon control for probabilistic Boolean networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Bayesian Network Analysis of Lysine Biosynthesis Pathway in Rice

# publications[].label
Fuzzy intervention in biological phenomena.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Altering steady-state probabilities in Probabilistic Boolean Networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Generating stochastic gene regulatory networks consistent with pathway information and steady-state behavior.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Decentralized Adaptive Control* *This work is supported in part by the National Science Foundation under Grant DMC-8452002 and in part by matching funds from the General Motors Foundation

# publications[].label
Research issues in genomic signal processing

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
A measurement-based approach for designing reduced-order controllers with guaranteed bounded error

# publications[].label
Bayesian Modeling of Plant Drought Resistance Pathway

# publications[].publisher
Association for Computing Machinery (ACM)

# publications[].label
Structure and Synthesis of PID Controllers

# researcherOn[].label
Identification of Drug Targets and Their Validation in Cancer Therapy Design

# researcherOn[].awardedBy.label
National Science Foundation - (Arlington, Virginia, United States)

# researcherOn[].label
Exploiting Heterogeneity and Metabolic Alterations in Cancer Therapy Design

# researcherOn[].awardedBy.label
National Science Foundation - (Arlington, Virginia, United States)

# researcherOn[].label
Cancer Therapeutics Through Theory and Experiment: From Cell Lines to Canine Tumors Grown on the Back of Mice

# researcherOn[].awardedBy.label
National Science Foundation - (Arlington, Virginia, United States)

# streetAddress
Texas A&M University; Electrical Engineering; 3128 TAMU

# schools[]
Texas A&M Engineering Experiment Station (TEES)

# etdChairOf[].label
Kapoor, Rajan (2017-05). Expectation-Maximization Based Mixture-Model Exploiting Pathway Knowledge for Cancer Heterogeneity. Master's Thesis.

# etdChairOf[].label
Arshad, Osama Ali (2017-02). On Boolean Modeling of Gene Regulatory Networks for Improved Cancer Combinatorial Therapy Design and Transcriptome Assemblies for Pacific Whiteleg Shrimp. Doctoral Dissertation.

# etdChairOf[].label
Lahiri, Aditya (2018-07). Bayesian Modeling of Plant Drought Resistance Pathway. Master's Thesis.

# etdChairOf[].label
Pal, Ranadip (2009-05). Modeling and control of genetic regulatory networks. Doctoral Dissertation.

# etdChairOf[].label
Layek, Ritwik (2012-07). Pathways, Networks and Therapy: A Boolean Approach to Systems Biology. Doctoral Dissertation.

# etdChairOf[].label
Mathur, Tushar Dutt (2018-11). Decentralized Control of an Activated Sludge Process via Modern Pid Tuning Techniques with Guaranteed Stability Margins. Master's Thesis.

# etdChairOf[].label
Satpathy, Sitanshu (2017-10). Probabilistic Analysis of Pair Wise Gene Interactions Using Support Vector Clustering. Master's Thesis.

# etdChairOf[].label
Saraf, Radhika Shailesh (2017-04). H2 Optimal Sensing Architecture with Model Uncertainty. Master's Thesis.

# etdChairOf[].label
Abante Llenas, Jordi (2016-04). HiMMe, A Next-Generation Sequencing Quality Assessment and Correction Tool Based on Hidden Markov Models. Master's Thesis.

# etdChairOf[].label
Dasgupta, Sumantra (2004-09). Reconstruction of 3D rigid body motion in  a virtual environment from a 2D image sequence. Master's Thesis.

# etdChairOf[].label
Mohanty, Anwoy Kumar (2015-08). Bayesian Models for Gene Regulatory Networks Applied to Cancer Tissues. Doctoral Dissertation.

# etdChairOf[].label
Xu, Hao (2005-02). Synthesis and design of PID controllers. Doctoral Dissertation.

# etdChairOf[].label
Mendonca, Rouella J. (2010-01). PI Control of Gene Expression in Tumorous Cell Lines. Master's Thesis.

# etdChairOf[].label
Al Kawam, Ahmad (2018-06). Towards the Next Generation of Clinical Decision Support: Overcoming the Integration Challenges of Genomic Data and Electronic Health Records. Doctoral Dissertation.

# etdChairOf[].label
Hill, Aaron Jamison (2013-08). Towards Real Time Optimal Auto-tuning of PID Controllers. Doctoral Dissertation.

# etdChairOf[].label
Varghese, Rajani Rajan (2014-01). Boolean Network Model of Hypoxia Stress Response Pathway. Master's Thesis.

# etdChairOf[].label
Rezaei Yousefi, Mohammadmahdi (2013-04). Optimal Intervention in Markovian Genetic Regulatory Networks for Cancer Therapy. Doctoral Dissertation.

# etdChairOf[].label
Mishra, Bibhu Prasad (2018-08). Customization of Treatment for Cancer Patients: An Engineering Approach. Doctoral Dissertation.

# etdChairOf[].label
Mishra, Bibhu Prasad (2018-06). Customization of Treatment for Cancer Patients: An Engineering Approach. Doctoral Dissertation.

# etdChairOf[].label
Choudhary, Ashish (2006-10). Intervention in gene regulatory networks. Doctoral Dissertation.

# etdChairOf[].label
Katiyar, Ashish (2017-04). Determination of Cancer Tissue Heterogeneity. Master's Thesis.

# etdChairOf[].label
Al Kawam, Ahmad (2018-08). Towards the Next Generation of Clinical Decision Support: Overcoming the Integration Challenges of Genomic Data and Electronic Health Records. Doctoral Dissertation.

# etdChairOf[].label
Vakulabaranam Sridharan, Sriram (2015-01). Biological Pathways Based Approaches to Model and Control Gene Regulatory Networks. Doctoral Dissertation.

# etdChairOf[].label
Pal, Ranadip (2004-11). Discovering relationships in genetic regulatory networks. Master's Thesis.

# etdChairOf[].label
Guo, Zhengyu (2017-11). Applications of High-Throughput Sequencing Data Analysis in Transcriptional Studies. Doctoral Dissertation.

# etdChairOf[].label
Sundararajan Venkatasubramani, Priyadharshini (2017-08). Bayesian Network Modeling and Inference in Plant Gene Networks And Analysis of Sequencing and Imaging Data. Doctoral Dissertation.

# etdChairOf[].label
Shahrokh Esfahani, Mohammad (2014-04). Using Prior Knowledge in the Design of Classifiers. Doctoral Dissertation.