# positions[].organizations[].label
College of Agriculture and Life Sciences

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30 Agricultural, Veterinary And Food Sciences

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3102 Bioinformatics And Computational Biology

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30 Agricultural, Veterinary And Food Sciences

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Cyclic Electron Flow Around Photosystem I

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1.1 Normal Biological Development And Functioning

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30 Agricultural, Veterinary And Food Sciences

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a. Thaliana

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30 Agricultural, Veterinary And Food Sciences

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Target Region Amplification Polymorphism (trap)

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30 Agricultural, Veterinary And Food Sciences

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30 Agricultural, Veterinary And Food Sciences

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30 Agricultural, Veterinary And Food Sciences

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3102 Bioinformatics And Computational Biology

# publications[].label
Effects of Aphid (Myzus persicae) Feeding on the Transcriptome and Metabolic Profile of Mature Leaf and Fruit Tissue of Tomato (Solanum lycopersicum cv. 'Oregon Spring') in Conventional and Organic Agriculture

# publications[].label
Plastid-expressed betaine aldehyde dehydrogenase gene in carrot cultured cells, roots, and leaves confers enhanced salt tolerance.

# publications[].label
Plastid transit peptides-where do they come from and where do they all belong? Multi-genome and pan-genomic assessment of chloroplast transit peptide evolution.

# publications[].label
Engineering Herbicide Resistance Pathways in Plastids

# publications[].label
Evidence for pre-climacteric activation of AOX transcription during cold-induced conditioning to ripen in European pear (Pyrus communis L.).

# publications[].label
Transcriptome Analysis Reveals Potential Mechanisms for Ethylene-Inducible Pedicel-Fruit Abscission Zone Activation in Non-Climacteric Sweet Cherry (Prunus avium L.).

# publications[].label
Munson's Legacy in Viticulture: A Genomic Exploration for Climate-Resilience

# publications[].label
Fruit crops in the era of genome editing: closing the regulatory gap.

# publications[].label
Pyrus communis: A Model System to Study Ripening and Senescence

# publications[].label
Beyond Ethylene: New Insights Regarding the Role of AOX in the Respiratory Climacteric

# publications[].label
Impact of heat stress, water stress, and their combined effects on the metabolism and transcriptome of grape berries.

# publications[].label
Biochar-A Panacea for Agriculture or Just Carbon?

# publications[].label
Understanding the Molecular Basis of Fusarium solani Mediated Root Rot in Pisum sativum.

# publications[].label
Genome-Wide Identification and Functional Characterization of RING-Type E3 Ligase Proteins in Pisum Sativum During Root Rot Disease

# publications[].label
Extensive Novel Genomic Variations in Mutant European Pear Individuals Revealed by Mapping to a Pangenome Reference

# publications[].label
Comparative analysis of predicted plastid-targeted proteomes of sequenced higher plant genomes.

# publications[].label
Transcriptome datasets from leaves and fruits of the sweet cherry cultivars 'Bing', 'Lapins' and 'Rainier'.

# publications[].label
Rootstock scion somatogenetic interactions in perennial composite plants.

# publications[].label
Structure and Genome Organization of Cherry Virus A (Capillovirus, Betaflexiviridae) from China Using Small RNA Sequencing.

# publications[].label
An Arabidopsis mutant with high cyclic electron flow around photosystem I (hcef) involving the NADPH dehydrogenase complex.

# publications[].label
Effect of phyllotactic position and cultural treatments toward successful direct shoot organogenesis in dwarf 'Pixie' grapevine (Vitis vinifera L.)

# publications[].label
Methods of analysis of Chloroplast Genomes of C3, Kranz type C4 and Single Cell C4 photosynthetic members of Chenopodiaceae

# publications[].label
A Total Systems Approach to Developing a Sustainable, Stem-Free Sweet Cherry Production, Processing and Marketing System

# publications[].publisher
International Society for Horticultural Science (ISHS)

# publications[].label
Both conventionally and organically fertilized tomatoes maintain fruit quality through uncontrolled green peach aphid infestation, with a transcriptional shift towards catabolism

# publications[].label
Involvement of phytochrome(s), Ca2+ and phosphorylation in light-dependent control of transcript levels for plastid genes (psbA, psaA and rbcL) in rice (Oryza sativa)

# publications[].label
Glyoxylic acid overcomes 1-MCP-induced blockage of fruit ripening in Pyrus communis L. var. DAnjou

# publications[].label
Manipulating Fruit Genomes - Discovery to Application

# publications[].label
Comparative ultrastructure of fruit plastids in three genetically diverse genotypes of apple (Malusdomestica Borkh.) during development.

# publications[].label
Glyoxylic acid overcomes 1-MCP-induced blockage of fruit ripening in Pyrus communis L. var. 'D'Anjou'.

# publications[].label
Identification of Differentially Expressed Genes between "Honeycrisp" and "Golden Delicious" Apple Fruit Tissues Reveal Candidates for Crop Improvement

# publications[].label
Challenges and opportunities in pear breeding

# publications[].label
Defects in the Expression of Chloroplast Proteins Leads to H2O2 Accumulation and Activation of Cyclic Electron Flow around Photosystem I.

# publications[].label
Whole genome sequencing of peach (Prunus persica L.) for SNP identification and selection.

# publications[].label
Transcriptome analysis reveals activation of detoxification and defense mechanisms in smoke-exposed Merlot grape (Vitis vinifera) berries.

# publications[].label
PGR-Modification of core phosphorylation in photosystem II assembly using chloroplast transformation

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PHYLOGENY OF THE CARYOPHYLLALES SENSU LATO: REVISITING HYPOTHESES ON POLLINATION BIOLOGY AND PERIANTH DIFFERENTIATION IN THE CORE CARYOPHYLLALES

# publications[].label
Keep the DNA rolling: Multiple Displacement Amplification of archival plant DNA extracts

# publications[].label
Rapid and accurate pyrosequencing of angiosperm plastid genomes.

# publications[].label
Changes in ascorbate and associated gene expression during development and storage of potato tubers (Solanum tuberosum L.)

# publications[].label
UV-C light inactivation kinetics of Penicillium expansum on pear surfaces: Influence on physicochemical and sensory quality during storage

# publications[].label
Evaluation of Gene Editing Approaches in Higher Plants

# publications[].label
Methods of analysis of chloroplast genomes of C3, Kranz type C4 and Single Cell C4 photosynthetic members of Chenopodiaceae.

# publications[].label
Cell wall remodeling and inositol metabolism coexpression modules associated with nut size in Carya illinoinensis cvs. 'Mahan' and 'Tiny tim'.

# publications[].label
Characterization of LF9, an octoploid strawberry genotype selected for rapid regeneration and transformation.

# publications[].label
CRISPR-associated nucleases: the Dawn of a new age of efficient crop improvement.

# publications[].label
Understanding the Diversity of Fruit Plastids

# publications[].label
Transgenic and genome-edited fruits: background, constraints, benefits, and commercial opportunities.

# publications[].label
Beyond Ethylene: New Insights Regarding the Role of Alternative Oxidase in the Respiratory Climacteric.

# publications[].label
Understanding the Needs of Horticultural and Specialty Crop Industry in Texas

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The Role of Light-Dark Regulation of the Chloroplast ATP Synthase.

# publications[].label
Genomic Characterization of Mutation-Bred Pears by Long-Read Sequencing

# publications[].label
Chloroplast genetic engineering to improve agronomic traits.

# publications[].label
Re-conceptualizing the In Vitro Production Pipeline

# publications[].label
Comparative genomics analysis in Prunoideae to identify biologically relevant polymorphisms.

# publications[].label
Alternative Oxidase Interacts with SNF1 Kinase to Modulate Energy Metabolism During Pear Fruit Ripening

# publications[].label
CisSERS: Customizable In Silico Sequence Evaluation for Restriction Sites.

# publications[].label
Understanding Root Rot Disease in Agricultural Crops

# publications[].label
ASAP: amplification, sequencing & annotation of plastomes.

# publications[].label
Antisense expression of peach mildew resistance locus O (PpMlo1) gene confers cross-species resistance to powdery mildew in Fragaria x ananassa.

# publications[].label
Green light control of plant form and function

# publications[].label
In vitro cultures and regeneration of Bienertia sinuspersici (Chenopodiaceae) under increasing concentrations of sodium chloride and carbon dioxide.

# publications[].label
Mechanism of Regulation of Gene Expression for Chloroplast Proteins

# publications[].label
Variability in Fruit Yield and Quality of Genetically Diverse Tomato Cultivars in Response to Different Biochars

# publications[].label
Tree Fruit and Nut Crops at the Dawn of the Pangenomic Era

# publications[].label
Involvement of G-proteins, calmodulin and tagetitoxin-sensitive RNA polymerase in light-regulated expression of plastid genes (psbA, psaA and rbcL) in rice (Oryza sativa L.)

# publications[].label
Pangenome Analysis of Pyrus Reveals Potential Role of Transcription Factors in Recent Adaptation to Arid Environments

# publications[].label
Evaluation of CRISPR-associated Nucleases for the Efficiency of Gene Editing Using a Transient Protoplast-based Expression System

# publications[].label
Long-read metagenomic dataset from domestic rabbit manure and domestic rabbit manure-derived vermicompost.

# publications[].label
Identification of QTLs Associated with Powdery Mildew Resistance in Sweet Cherry

# publications[].label
Efficient Stable Genetic Transformation of Pea (Pisum sativum)

# publications[].label
Multigene engineering: dawn of an exciting new era in biotechnology.

# publications[].label
Evaluation of Parameters Affecting Agrobacterium-Mediated Transient Gene Expression in Industrial Hemp (Cannabis sativa L.).

# publications[].label
Limitations to photosynthesis by proton motive force-induced photosystem II photodamage.

# publications[].label
Transposons played a major role in the diversification between the closely related almond and peach genomes: results from the almond genome sequence.

# publications[].label
Spectrometric techniques for elemental profile analysis associated with bitter pit in apples

# publications[].label
Detection of SNP and validation of a SFP InDel (deletion) in inverted repeat region of the Prunus species chloroplast genome

# publications[].label
Evidence for the Involvement of Vernalization-related Genes in the Regulation of Cold-induced Ripening in 'D'Anjou' and 'Bartlett' Pear Fruit.

# publications[].label
Thioredoxin-insensitive plastid ATP synthase that performs moonlighting functions.

# publications[].publisher
Proceedings of the National Academy of Sciences

# publications[].label
(267) A Rapid Transformation System for Octoploid Strawberry

# publications[].publisher
American Society For Horticultural Science

# publications[].label
Concomitant phytonutrient and transcriptome analysis of mature fruit and leaf tissues of tomato (Solanum lycopersicum L. cv. Oregon Spring) grown using organic and conventional fertilizer

# publications[].label
Understanding protein import in diverse non-green plastids.

# publications[].label
The Novel use of Small Molecules for Mitigating Herbicide Drift in Grapevines

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The role of conventional plant breeding in ensuring safe levels of naturally occurring toxins in food crops

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Identification of QTL Underlying Soluble Solids Content and Titratable Acidity in Sweet Cherry (Prunus avium L.)

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Genome editing in fruit, ornamental, and industrial crops.

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Map-based Cloning of Single Gene Traits and Quantitative Traits

# publications[].label
Comparative chloroplast genomics and phylogenetics of Fagopyrum esculentum ssp. ancestrale -a wild ancestor of cultivated buckwheat.

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Genome-Scale Characterization of Predicted Plastid-Targeted Proteomes in Higher Plants.

# publications[].label
Comparative Transcriptome Analysis of Emerging Young and Mature Leaves of Bienertia sinuspersici, a Single-Cell C4 Plant

# publications[].label
Understanding the Diversity of Plastids in Fruits

# publications[].label
Evaluating Heat and Drought Stress in Wine Grapes in Texas

# publications[].label
Relative Susceptibility of Grapevine Rootstocks to Dicamba Drift

# publications[].label
Comparative analysis of virus-specific small RNA profiles of three biologically distinct strains of Potato virus Y

# publications[].label
Ultraviolet-C light inactivation of Penicillium expansum on fruit surfaces

# publications[].label
Stable transformation of the cotton plastid genome and maternal inheritance of transgenes.

# publications[].label
Evaluation of multiple approaches to identify genome-wide polymorphisms in closely related genotypes of sweet cherry (Prunus avium L.).

# publications[].label
Chloroplast genetic engineering via organogenesis or somatic embryogenesis.

# publications[].label
Enhanced translation of a chloroplast-expressed RbcS gene restores small subunit levels and photosynthesis in nuclear RbcS antisense plants.

# publications[].publisher
Proceedings of the National Academy of Sciences

# publications[].label
Tobacco: A Model Plant for Understanding the Mechanism of Abiotic Stress Tolerance

# publications[].label
Identification of water use efficiency related genes in 'Garnem' almond-peach rootstock using time-course transcriptome analysis.

# publications[].label
Identification of root rot resistance QTLs in pea using Fusarium solani f. sp. pisi-responsive differentially expressed genes

# publications[].label
Organ-specific gene expression and genetic transformation for improving rice

# publications[].label
Inactivation of Escherichia coli Population on Fruit Surfaces Using Ultraviolet-C Light: Influence of Fruit Surface Characteristics

# publications[].label
Identification of Fusarium solani f. sp. pisi (Fsp) responsive genes in Pisum sativum

# publications[].label
Gene Expression Analysis Indicates Reactive Oxygen Species Stress Pathways Lead to Detoxification and Storage of Thiol Phenolic Compounds in Wine Grapes.

# publications[].label
Tree Fruit and Nut Crops at the Dawn of the Pangenomic Era

# publications[].label
Transcriptomic Analysis of Ethylene-inducible Pedicel-fruit Abscission Zone Formation in Sweet Cherry (Prunus avium L.)

# publications[].label
Neuropeptides and peptide hormones identified in codling moth, Cydia pomonella (Lepidoptera: Tortricidae).

# publications[].label
Development and Evaluation of an AxiomTM 60K SNP Array for Almond (Prunus dulcis).

# publications[].label
Resolving an ancient, rapid radiation in Saxifragales.

# publications[].label
Biochar - A Panacea for Agriculture or Just Carbon?

# publications[].label
Genetic diversity and relatedness of sweet cherry (prunus avium L.) cultivars based on single nucleotide polymorphic markers.

# publications[].label
The apple genome - harbinger of innovation for sustainable apple production

# publications[].label
Genomic Characterization of 'Munson' Grape Cultivars

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PHYLOGENETIC ANALYSIS OF THE PLASTID INVERTED REPEAT FOR 244 SPECIES: INSIGHTS INTO DEEPER-LEVEL ANGIOSPERM RELATIONSHIPS FROM A LONG, SLOWLY EVOLVING SEQUENCE REGION

# publications[].label
DNAjig: A New Approach for Building DNA Nanostructures

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Evidence for pre-climacteric activation of AOX transcription during cold-induced conditioning to ripen in European pear (Pyrus communis L.)

# publications[].label
Identification of Fusarium solani f. sp. pisi (Fsp) Responsive Genes in Pisum sativum.

# publications[].label
Genome editing reagent delivery in plants.

# publications[].label
Genome sequences of Photorhabdus luminescens strains isolated from entomopathogenic nematodes from southern India.

# publications[].label
Chloroplast Genetic Engineering Via Organogenesis or Somatic Embryogenesis

# publications[].label
Biomass Source of Biochar and Genetic Background of Tomato Influence Plant Growth and Development and Fruit Quality

# publications[].label
Concomitant phytonutrient and transcriptome analysis of mature fruit and leaf tissues of tomato (Solanum lycopersicum L. cv. Oregon Spring) grown using organic and conventional fertilizer.

# publications[].label
Nanopore sequencing data and structural variants identified in Prunus avium seedlings derived through mutagenesis.

# publications[].label
Comparative transcriptome analysis of emerging young and mature leaves of Bienertia sinuspersici, a single-cell C4 plant.

# publications[].label
Beyond Ethylene - AOX-mediated Fruit Ripening

# publications[].label
Draft genome data of Prunus avium cv 'Stella'.

# publications[].label
Regulation of plastid gene expression in rice involves calcium and protein phosphatases/kinases for signal transduction

# publications[].label
Transcriptomic Analysis of Developing Merlot Berries (Vitis vinifera) Exposed to Smoke Treatment Reveals Genes and Pathways Underlying Undesirable 'Smoke Taint' Attributes

# publications[].label
Survey Assessment of Production Practices, Marketing Perspectives, Education, Research, and Extension Needs of the Texas Pecan Industry

# publications[].label
Understanding Root Rot Disease in Agricultural Crops

# publications[].label
Reproducible Method for 1-Methylcylopropene (1MCP) Application and Quantitation for Post-Harvest Research

# publications[].label
Alternative Oxidase Likely Maintains ATP Biosynthesis During Pear Fruit Ripening

# publications[].label
Native Pathways to Science, Technology, Engineering, and Math Graduate Degrees

# publications[].label
A Transcript Accounting from Diverse Tissues of a Cultivated Strawberry

# publications[].label
Transformation of strawberry: The basis for translational genomics in Rosaceae

# publications[].label
Assessing consumers' preferences and willingness to pay for novel sliced packed fresh pears: A latent class approach.

# publications[].label
Pyrus Pangenome Enables Identification of Genes Involved in Adaptation to Niche Environments

# publications[].label
Evaluation of pea accessions and commercial cultivars for fusarium root rot resistance

# publications[].label
Development of a highly efficient Axiom 70 K SNP array for Pyrus and evaluation for high-density mapping and germplasm characterization.

# publications[].label
Identification of Root Rot Resistance QTLs in Pea Using Fusarium solani f. sp. pisi-Responsive Differentially Expressed Genes.

# publications[].label
Application of Cydia pomonella expressed sequence tags: Identification and expression of three general odorant binding proteins in codling moth.

# publications[].label
Rosaceaous Genome Sequencing: Perspectives and Progress

# publications[].label
Characterization of ethylene-inducible pedicel-fruit abscission zone formation in non-climacteric sweet cherry (Prunus avium L.)

# publications[].label
Rapid gene-based SNP and haplotype marker development in non-model eukaryotes using 3'UTR sequencing.

# publications[].label
Comparative analysis of virus-specific small RNA profiles of three biologically distinct strains of Potato virus Y in infected potato (Solanum tuberosum) cv. Russet Burbank.

# publications[].label
Genome-Scale Characterization of Predicted Plastid-Targeted Proteomes in Higher Plants

# publications[].label
Mineralization potential of spent coffee grounds and other nutrient sources

# publications[].label
Metatranscriptomics Approach to Understand the Impact of Crop-Residue Derived Biochar on Root Associated-Microbiome in Horticulture Crops

# publications[].label
Population structure and genetic diversity of Bromus tectorum within the small grain production region of the Pacific Northwest.

# publications[].label
Spent Coffee Grounds As an Improved Germination Media for Spinach

# publications[].label
Comparison of bacterial communities from inside and outside of Rhizoctonia bare patches in wheat

# publications[].label
The NAC transcription factor ATAF2 promotes ethylene biosynthesis and response in Arabidopsis thaliana seedlings.

# publications[].label
Molecular Farming for the Production of Animal Proteins.

# publications[].label
Chloroplast Genome Data of Tecticornia indica, a Hygrohalophytic C4 Plant Species

# publications[].label
Comparative Chloroplast Genomics of C3, Kranz type C4 and Single Cell C4 photosynthetic members of Chenopodiaceae

# publications[].label
Role of bacterial communities in the natural suppression of Rhizoctonia solani bare patch disease of wheat (Triticum aestivum L.).

# publications[].label
The genome of the domesticated apple (Malus  domestica Borkh.).

# publications[].label
Bacterial Communities on Wheat Grown Under Long-Term Conventional Tillage and No-Till in the Pacific Northwest of the United States

# publications[].label
Evaluation of Select Plant Growth Regulators on Improving Fruit Set in Apricot (Prunus armeniaca)

# publications[].label
Identification of QTL Underlying Powdery Mildew and Bacterial Canker Infection in Sweet Cherry (Prunus avium L.)

# publications[].label
Green light adjusts the plastid transcriptome during early photomorphogenic development.

# publications[].label
Evidence for the Involvement of Vernalization-related Genes in the Regulation of Cold-induced Ripening in DAnjou and Bartlett Pear Fruit

# organizations[]
College of Agriculture and Life Sciences