# overview
My research focuses on genomic signal processing and image analysis.

# keywords[]
3102 Bioinformatics And Computational Biology

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Mean Objective Cost Of Uncertainty (mocu)

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3102 Bioinformatics And Computational Biology

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5 Development Of Treatments And Therapeutic Interventions

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8.4 Research Design And Methodologies (health Services)

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8 Health And Social Care Services Research

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4603 Computer Vision And Multimedia Computation

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3102 Bioinformatics And Computational Biology

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0801 Artificial Intelligence And Image Processing

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5 Development Of Treatments And Therapeutic Interventions

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3403 Macromolecular And Materials Chemistry

# keywords[]
Mean Objective Cost Of Uncertainty (mocu)

# keywords[]
3102 Bioinformatics And Computational Biology

# keywords[]
8.4 Research Design And Methodologies (health Services)

# keywords[]
8 Health And Social Care Services Research

# keywords[]
3102 Bioinformatics And Computational Biology

# keywords[]
3102 Bioinformatics And Computational Biology

# keywords[]
5 Development Of Treatments And Therapeutic Interventions

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Stem Cell Research - Nonembryonic - Human

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3102 Bioinformatics And Computational Biology

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Intercellular Signaling Peptides And Proteins

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4603 Computer Vision And Multimedia Computation

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Optimal Control Of Probabilistic Boolean Networks

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Bayesian Partially Observed Boolean Dynamical System

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Bayesian Minimum Mean-square Error Estimator

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3.1 Primary Prevention Interventions To Modify Behaviours Or Promote Wellbeing

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3 Prevention Of Disease And Conditions, And Promotion Of Well-being

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Mean Objective Cost Of Uncertainty (mocu)

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4.1 Discovery And Preclinical Testing Of Markers And Technologies

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6 Evaluation Of Treatments And Therapeutic Interventions

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5 Development Of Treatments And Therapeutic Interventions

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4603 Computer Vision And Multimedia Computation

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3102 Bioinformatics And Computational Biology

# keywords[]
3102 Bioinformatics And Computational Biology

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3102 Bioinformatics And Computational Biology

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1.1 Normal Biological Development And Functioning

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Clinical Trials And Supportive Activities

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Bayesian Partially Observed Boolean Dynamical System

# keywords[]
3102 Bioinformatics And Computational Biology

# keywords[]
3102 Bioinformatics And Computational Biology

# keywords[]
5 Development Of Treatments And Therapeutic Interventions

# keywords[]
Mean Objective Cost Of Uncertainty (mocu)

# keywords[]
3102 Bioinformatics And Computational Biology

# keywords[]
1.1 Normal Biological Development And Functioning

# keywords[]
4603 Computer Vision And Multimedia Computation

# keywords[]
4606 Distributed Computing And Systems Software

# keywords[]
4603 Computer Vision And Multimedia Computation

# keywords[]
Mean Objective Cost Of Uncertainty (mocu)

# keywords[]
4603 Computer Vision And Multimedia Computation

# keywords[]
4009 Electronics, Sensors And Digital Hardware

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5102 Atomic, Molecular And Optical Physics

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5 Development Of Treatments And Therapeutic Interventions

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Insulin-like Growth Factor Binding Protein 2

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3102 Bioinformatics And Computational Biology

# keywords[]
3102 Bioinformatics And Computational Biology

# keywords[]
4603 Computer Vision And Multimedia Computation

# keywords[]
3102 Bioinformatics And Computational Biology

# educationAndTraining[].organization.label
Fairleigh Dickinson University - (Teaneck, New Jersey, United States)

# educationAndTraining[].organization.label
Stevens Institute of Technology - (Hoboken, New Jersey, United States)

# educationAndTraining[].organization.label
Rutgers University - (New Brunswick, New Jersey, United States)

# educationAndTraining[].organization.label
Fairleigh Dickinson University - (Teaneck, New Jersey, United States)

# awardsAndHonors[].label
Association of Former Students University-Level Distinguished Achievement Award, The

# awardsAndHonors[].label
Robert M. Kennedy Class of '26 Professorship

# publications[].label
Optimal binary morphological bandpass filters induced by granulometric spectral representation

# publications[].label
Robust intervention in Probabilistic Boolean Networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Which control gene should be used in genetic regulatory networks?

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Robustness of optimal binary filters for sparse noise

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Optimal constrained stationary intervention in gene regulatory networks.

# publications[].label
Incorporating prior knowledge induced from stochastic differential equations in the classification of stochastic observations.

# publications[].label
Optimal classifiers with minimum expected error within a Bayesian framework-Part I: Discrete and Gaussian models

# publications[].label
Modeling Genetic Regulatory Networks by Sigmoidal Functions: A Joint Genetic Algorithm and Kalman Filtering Approach

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Designing Experiments for Optimal Reduction of Uncertainty in Gene Regulatory Networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Accurate and reliable cancer classification based on probabilistic inference of pathway activity.

# publications[].label
Hausdorf-metric interpretation of convergence in the Matheron topology for binary mathematical morphology

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Evaluating gene set enrichment analysis via a hybrid data model.

# publications[].label
Maximum-likelihood estimation and optimal filtering in the nondirectional, one-dimensional binomial germ-grain model

# publications[].label
A parallel programming framework with Markovian messaging for LC-MS peptide detection

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Comparative analysis of discrete and continuous Boolean models

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Modeling the next generation sequencing sample processing pipeline for the purposes of classification.

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Design and analysis of fuzzy morphological algorithms for image processing

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
RMS BOUNDS AND SAMPLE SIZE CONSIDERATIONS FOR ERROR ESTIMATION IN LINEAR DISCRIMINANT ANALYSIS

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Model-based study of the Effectiveness of Reporting Lists of Small Feature Sets using RNA-Seq Data

# publications[].publisher
Association for Computing Machinery (ACM)

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
What can we expect from high-dimensional feature selection

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Dynamical modeling of drug effect using hybrid systems.

# publications[].label
SNiPer 500K: A Novel SNP Genotype Calling Algorithm

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Analytic formulation of optimal structural intervention strategies in Boolean Networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Evaluating dynamic effects of copy number alterations on gene expression using a single transcription model.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Analysis and modeling of time-course gene-expression profiles from nanomaterial-exposed primary human epidermal keratinocytes

# publications[].label
Classifier Error Estimator Performance in a Bayesian Context

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Steady-state Analysis of Genetic Regulatory Networks Modeled by Nonlinear Ordinary Differential Equations

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Generalized Consistent Error Estimator of Linear Discriminant Analysis

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Inferring the Structure of Genetic Regulatory Networks Using Information Theoretic Tools

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Comparing automatic and manual image processing in FLARE assay analysis for colon carcinogenesis

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Feature selection: We've barely scratched the surface

# publications[].label
Random Matrix Theory in Pattern Classification: An Application to Error Estimation

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Modeling and systematic analysis of LC-MS proteomics pipeline

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Minimal representation of -openings via pattern bases

# publications[].label
Review of stochastic hybrid systems with applications in biological systems modeling and analysis.

# publications[].label
Validation of computational methods in genomics.

# publications[].label
Clustering algorithms do not learn, but they can be learned

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Inference of a probabilistic Boolean network from a single observed temporal sequence.

# publications[].label
A New Sensitivity Measure for Probabilistic Boolean Networks based on Steady-State Distributions

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Guest Editorial-Special Collection Topic: Statistical Systems Theory in Cancer Modeling, Diagnosis, and Therapy.

# publications[].label
Analytic Representation of Bayes Labeling and Bayes Clustering Operators for Random Labeled Point Processes

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Unraveling gene-gene interactions regulated by ligands of the aryl hydrocarbon receptor.

# publications[].label
The Model-Based Study of the Effectiveness of Reporting Lists of Small Feature Sets Using RNA-Seq Data.

# publications[].label
Design of statistically optimal morphological operators

# publications[].label
Classification of quantized small sample data

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Detection of osteoporosis by morphological granulometries

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Probabilistic Boolean Networks: a rule-based uncertainty model for gene regulatory networks.

# publications[].label
Application of the Hausdorff metric in gray-scale mathematical morphology via truncated umbrae

# publications[].label
A Bayesian Framework for Robust Kalman Filtering Under Uncertain Noise Statistics

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Relationship between the accuracy of classifier error estimation and complexity of decision boundary

# publications[].label
Signal Processing in Genomics [From The Guest Editors]

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Biomarker development: prudence, risk, and reproducibility.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
THE PEAKING PHENOMENON REVISITED: THE CASE WITH FEATURE SELECTION

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
DYNAMICAL ANALYSIS OF DRUG EFFICACY AND MECHANISM OF ACTION USING GFP REPORTERS

# publications[].label
The role of certain Post classes in Boolean network models of genetic networks.

# publications[].publisher
Proceedings of the National Academy of Sciences

# publications[].label
Optimal restoration of compressed biomedical images: a discrete lattice theoretic approach

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Genomic profiles and predictive biological networks in oxidant-induced atherogenesis.

# publications[].label
Incorporation of Biological Pathway Knowledge in the Construction of Priors for Optimal Bayesian Classification.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Characterization of the effectiveness of reporting lists of small feature sets relative to the accuracy of the prior biological knowledge.

# publications[].label
Gene prediction using multinomial probit regression with Bayesian gene selection

# publications[].label
Morphological granulometric estimation of random patterns in the context of parameterized random sets

# publications[].label
Optimal and adaptive design of logical granulometric filters

# publications[].label
Optimal binary differencing filters: design, logic complexity, precision analysis, and application to digital document processing

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
PHENOTYPICALLY CONSTRAINED BOOLEAN NETWORK INFERENCE WITH PRESCRIBED STEADY STATES

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Can Markov chain models mimic biological regulation?

# publications[].label
Estimation of optimal morphological -opening parameters based on independent observation of signal and noise pattern spectra

# publications[].label
ON THE CONSTRAINT OF GENE REGULATORY NETWORKS TO CANALIZING FUNCTIONS AND POST CLASSES

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Binary texture estimation using linear samples

# publications[].label
Selection Policy-Induced Reduction Mappings for Boolean Networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Recent advances in intervention in markovian regulatory networks.

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Size distributions for multivariate morphological granulometries: Texture classification and statistical properties

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Adaptive Intervention in Probabilistic Boolean Networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Granulometric estimation of sizing parameters and proportions for gamma-distributed grain sizes

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Scientific knowledge is possible with small-sample classification.

# publications[].label
Output-Feedback Model Predictive Control of Biological Phenomena Modeled by S-Systems

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Assessing the Efficacy of Molecularly Targeted Agents by Using Kalman Filter

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Designing Enhanced Classifiers Using Prior Process Knowledge: Regularized Maximum-Likelihood

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Performance of feature-selection methods in the classification of high-dimension data

# publications[].label
Exact performance of error estimators for discrete classifiers

# publications[].label
A constant-time algorithm for erosions/dilations with application to morphological texture feature computation

# publications[].label
On the epistemological crisis in genomics.

# publications[].label
Hybrid Human-machine Non-linear Filter Design Using Envelopes

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Unbiased bootstrap error estimation for linear discriminant analysis.

# publications[].label
New challenges in non-linear signal and image processing

# publications[].label
Time-Based Switching Control of Genetic Regulatory Networks: Toward Sequential Drug Intake for Cancer Therapy.

# publications[].label
Reconstruction of Genetic Regulatory Networks Based on the Posterior Probabilities of Gene Regulations

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Maximum-likelihood estimation for the discrete Boolean random function

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Autonomous efficient experiment design for materials discovery with Bayesian model averaging

# publications[].label
Optimal experimental design for materials discovery

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Assignment of terminal penalties in controlling genetic regulatory networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Bidirectional relationships and attractor structure of Boolean networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Morphological texture-based maximum-likelihood pixel classification based on local granulometric moments

# publications[].label
Corrected small-sample estimation of the Bayes error.

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Efficient selection of feature sets possessing high coefficients of determination based on incremental determinations

# publications[].label
General nonlinear framework for the analysis of gene interaction via multivariate expression arrays.

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Small-sample estimation of the error of the optimal binary filter

# publications[].label
Modeling and systematic analysis of biomarker validation using selected reaction monitoring.

# publications[].label
Need for fuzzy morphology: erosion as a fuzzy marker

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Optimal classifiers with minimum expected error within a Bayesian framework - Part II: Properties and performance analysis

# publications[].label
Noninvasive detection of candidate molecular biomarkers in subjects with a history of insulin resistance and colorectal adenomas.

# publications[].publisher
American Association for Cancer Research (AACR)

# publications[].label
The granulometric size density in filter optimization

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Impact of missing value imputation on classification for DNA microarray gene expression data--a model-based study.

# publications[].label
Asymptotic joint normality of the granulometric moments

# publications[].label
Effect of normalization on microarray-based classification

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Unification of nonlinear filtering in the context of binary logical calculus, part II: Gray-scale filters

# publications[].label
Unsupervised morphological granulometric texture segmentation of digital mammograms

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Fast run-length-based algorithm for one-dimensional flat opening

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Steady-state probabilities for attractors in probabilistic Boolean networks

# publications[].label
Robust optimal granulometric bandpass filters

# publications[].label
External control in a special class of Probabilistic Boolean Networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Optimal mean-square N-observation digital morphological filters II. Optimal gray-scale filters

# publications[].label
Adaptive intervention in probabilistic boolean networks.

# publications[].label
External control in Markovian genetic regulatory networks: the imperfect information case.

# publications[].label
Determination of the optimal number of features for quadratic discriminant analysis via the normal approximation to the discriminant distribution

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Modeling treatment and drug effects at the molecular level using hybrid system theory

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Nonlinear probit gene classification using mutual information and wavelet-based feature selection

# publications[].label
Logically efficient spatial resolution conversion using paired increasing operators

# publications[].label
Robust openings in the context of a prior distribution governing the parameters of the random set model

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
A COD BASED REDUCTION ALGORITHM FOR BOOLEAN AND PROBABILISTIC BOOLEAN NETWORKS

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Optimization techniques for real-time image processing

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
A comparison study of optimal and suboptimal intervention policies for gene regulatory networks in the presence of uncertainty.

# publications[].label
The illusion of distribution-free small-sample classification in genomics.

# publications[].label
Pathway Analysis in the Context of Bayesian Networks  Mathematical Modeling of Master and Canalizing Genes

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Intervention in gene regulatory networks via phenotypically constrained control policies based on long-run behavior.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Chemopreventive n-3 polyunsaturated fatty acids reprogram genetic signatures during colon cancer initiation and progression in the rat.

# publications[].publisher
American Association for Cancer Research (AACR)

# publications[].label
Classification of trabecular structure in magnetic resonance images based on morphological granulometries.

# publications[].label
Optimal mean-square N-observation digital morphological filters I. Optimal binary filters

# publications[].label
Stationary and structural control in gene regulatory networks: basic concepts

# publications[].label
Sequential Therapeutic Response Modeling for Tumor Treatment Using Computational Hybrid Control Systems Approach.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Optimal experimental design in the context of canonical expansions

# publications[].publisher
Institution of Engineering and Technology (IET)

# publications[].label
CONDITIONING-BASED MODEL FOR THE REGULATORY ACTIVITIES OF microRNAs IN SPECIFIC DIETARY CONTEXTS

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Inference of Gene Regulatory Networks Using Genetic Programming and Kalman Filter

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Steady-state analysis of genetic regulatory networks modelled by probabilistic boolean networks.

# publications[].label
Gray-scale granulometries compatible with spatial scalings

# publications[].label
Simulation toolbox for 3D-FISH spot-counting algorithms

# publications[].label
Exact correlation between actual and estimated errors in discrete classification

# publications[].label
Inference of gene regulatory networks using S-system: a unified approach.

# publications[].publisher
Institution of Engineering and Technology (IET)

# publications[].label
Probabilistic reconstruction of the tumor progression process in gene regulatory networks in the presence of uncertainty.

# publications[].label
Binarization of microarray data on the basis of a mixture model.

# publications[].label
A switching algorithm for design of optimal increasing binary filters over large windows

# publications[].label
The use of first-order structuring-element libraries to design morphological filters

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
The effect of microarray image compression on expression-based classification

# publications[].label
Robust intervention in probabilistic Boolean networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Bayes Clustering Operators for Known Random Labeled Point Processes

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Closed-form representation of convolution, dilation, and erosion in the context of image algebra.

# publications[].label
A random signal model for cDNA microarrays

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Cancer therapy design based on pathway logic.

# publications[].label
SNiPer-HD: improved genotype calling accuracy by an expectation-maximization algorithm for high-density SNP arrays.

# publications[].label
Using the minimum description length principle to reduce the rate of false positives of best-fit algorithms.

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Dynamics preserving size reduction mappings for probabilistic boolean networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Classifier Design Given an Uncertainty Class of Feature Distributions via Regularized Maximum Likelihood and the Incorporation of Biological Pathway Knowledge in Steady-State Phenotype Classification.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Filtering clutter by optimal granulometric bandpass filters

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
The dual representation of gray-scale morphological filters

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Which is better for cDNA-microarray-based classification: ratios or direct intensities.

# publications[].label
Which is better: holdout or full-sample classifier design?

# publications[].label
Application of dynamic programming in genetic regulatory networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Learning restricted Boolean network model by time-series data.

# publications[].label
Optimal Wiener and homomorphic filtration: Review

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
QUANTIFICATION OF DATA EXTRACTION NOISE IN PROBABILISTIC BOOLEAN NETWORK MODELING

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
On approximate stochastic control in genetic regulatory networks.

# publications[].publisher
Institution of Engineering and Technology (IET)

# publications[].label
Recursive maximum-likelihood estimation in the one-dimensional discrete Boolean random set model

# publications[].label
On the limitations of biological knowledge.

# publications[].label
Exact Sample Conditioned MSE Performance of the Bayesian MMSE Estimator for Classification Error-Part I: Representation

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Maximumlikelihood estimation for discrete Boolean models using linear samples

# publications[].label
Genomic signal processing: Diagnosis and therapy

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Digital measurement of gene expression in a cDNA micro-array

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Computational morphology and representation of operators between complete lattices

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Sample-Based Prior Probability Construction Using Biological Pathway Knowledge

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Effect of function perturbation on the steady-state distribution of genetic regulatory networks: Optimal structural intervention

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Design of statistically optimal stack filters

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Optimal linear granulometric estimation for random sets

# publications[].label
Inference of noisy nonlinear differential equation models for gene regulatory networks using genetic programming and Kalman filtering

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Conditional confidence intervals for the true classification error

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Generating Boolean networks with a prescribed attractor structure.

# publications[].label
Minimal search for the optimal mean-square digital gray-scale morphological filter

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Computational Gray-scale Mathematical Morphology on Lattices (A Comparator-based Image Algebra) Part 1: Architecture

# publications[].label
Granulometric estimation of distorted shapes

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Optimal Intervention in Markovian Gene Regulatory Networks With Random-Length Therapeutic Response to Antitumor Drug.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Relationship between the accuracy of classifier error estimation and distribution complexity

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Size-distribution estimation in process fluids by ultrasound for particle sizes in the wavelength range

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
A criterion for choosing between full-sample and hold-out classifier design

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Systems biology for organotypic cell cultures.

# publications[].label
Reporting bias when using real data sets to analyze classification performance.

# publications[].label
Optimal infinite-horizon control for probabilistic Boolean networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Projection-generated Fourier descriptors that are robust with respect to both random point noise and occlusion

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Role of shape in morphological bases for digital moving-average filters

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Synthesizing Boolean networks with a given attractor structure

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Multi-class cancer classification using multinomial probit regression with Bayesian gene selection.

# publications[].publisher
Institution of Engineering and Technology (IET)

# publications[].label
A lattice-based minimal gray-scale switching algorithm for obtaining the optimal increasing filter from the optimal filter

# publications[].label
Reducing the complexity of a PBN while preserving its dynamical structure

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Is cross-validation valid for small-sample microarray classification?

# publications[].label
DRUG EFFECT STUDY ON PROLIFERATION AND SURVIVAL PATHWAYS ON CELL LINE-BASED PLATFORM: A STOCHASTIC HYBRID SYSTEMS APPROACH

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
RNAi microarray analysis in cultured mammalian cells.

# publications[].label
Intrinsically Bayesian Robust Classifier for Single-Cell Gene Expression Time Series in Gene Regulatory Networks

# publications[].publisher
Association for Computing Machinery (ACM)

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Confidence intervals for the true classification error conditioned on the estimated error.

# publications[].label
Model-Based Morphology: The Opening Spectrum

# publications[].label
Relation Between Permutation-Test P Values and Classifier Error Estimates

# publications[].label
Quantification of the impact of feature selection on the variance of cross-validation error estimation.

# publications[].label
Model-based evaluation of clustering validation measures

# publications[].label
Optimal nonlinear filter for signal-union-noise and runlength analysis in the directional one-dimensional discrete Boolean random set model

# publications[].label
Microarray Image Analysis and Gene Expression Ratio Statistics

# publications[].label
Moments and Root-Mean-Square Error of the Bayesian MMSE Estimator of Classification Error in the Gaussian Model.

# publications[].label
Exact Sample Conditioned MSE Performance of the Bayesian MMSE Estimator for Classification Error-Part II: Consistency and Performance Analysis

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Accelerated search for BaTiO3-based piezoelectrics with vertical morphotropic phase boundary using Bayesian learning.

# publications[].publisher
Proceedings of the National Academy of Sciences

# publications[].label
Newton, laplace, and the epistemology of systems biology.

# publications[].label
Is there correlation between the estimated and true classification errors in small-sample settings?

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
REDUCTION MAPPINGS AND CONTROL POLICIES FOR INTERVENTION IN BOOLEAN NETWORKS

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Stochastic Modeling of Dynamic Effects of Copy Number Alterations upon Gene Expression Levels

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Inferring gene regulatory networks from time series data using the minimum description length principle.

# publications[].label
Integrating Multiscale Modeling with Drug Effects for Cancer Treatment.

# publications[].label
PERFORMANCE OF LINEAR DISCRIMINANT ANALYSIS IN STOCHASTIC SETTINGS

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Optimal iterative increasing binary morphological filters

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Multivariate measurement of gene expression relationships.

# publications[].label
Texture-region coding based on Boolean random sets

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Simulation of cDNA microarrays via a parameterized random signal model.

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
A Bayesian approach to nonlinear probit gene selection and classification

# publications[].label
Spectral analysis on time-course expression data: detecting periodic genes using a real-valued iterative adaptive approach.

# publications[].label
Inference of Nonlinear ODE-Based Gene Regulatory Networks via Intrinsically Bayesian Robust Kalman Filtering

# publications[].publisher
Association for Computing Machinery (ACM)

# publications[].label
Bayesian robustness in the control of gene regulatory networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Bayesian Optimal Control of Markovian Genetic Regulatory Networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Intervention in gene regulatory networks via greedy control policies based on long-run behavior.

# publications[].label
Detecting Multivariate Gene Interactions in RNA-Seq Data Using Optimal Bayesian Classification.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
EFFECTS OF PARTIAL REPORTING OF CLASSIFICATION RESULTS

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
How many samples are needed to build a classifier: a general sequential approach.

# publications[].label
Optimal Control in a Family of Boolean Networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Impact of error estimation on feature selection

# publications[].label
Probabilistic Boolean Networks as Models for Gene Regulation

# publications[].label
Multivariate morphological granulometric texture classification using Walsh and wavelet features

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Modeling Cyclic and Acyclic Therapeutic Methods with Persistent Intervention Effect in Probabilistic Boolean Networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Implementation of the umbra transform in the SLIP image processing language

# publications[].label
Hole spectrum: model-based optimization of morphological filters

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Robust Smoothing for State-Space Models with Unknown Noise Statistics

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
BPDA2d--a 2D global optimization-based Bayesian peptide detection algorithm for liquid chromatograph-mass spectrometry.

# publications[].label
Automatic design of morphological operators

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Molecular classification of cutaneous malignant melanoma by gene expression profiling.

# publications[].label
Dynamical modeling of uncertain interaction-based genomic networks.

# publications[].label
Universal Systolic Architecture For Morphological And Convolutional Image Filters

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
OPTIMAL EXPERIMENTAL DESIGN IN CANONICAL EXPANSIONS WITH APPLICATIONS TO SIGNAL COMPRESSION

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Optimal infinite horizon control for probabilistic Boolean networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Shape characterization of silver halide crystals

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Morphological spot counting from stacked images for automated analysis of gene copy numbers by fluorescence in situ hybridization.

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
CRITICAL BOOLEAN NETWORKS REQUIRE MINIMAL INTERVENTION RATE

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Altering steady-state probabilities in Probabilistic Boolean Networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Inference from clustering with application to gene-expression microarrays.

# publications[].label
A fast Branch-and-Bound algorithm for U-curve feature selection

# publications[].label
Small sample issues for microarray-based classification.

# publications[].label
Parallel Computation and Visualization Tools for Codetermination Analysis of Multivariate Gene Expression Relations

# publications[].label
Existence and synthesis of minimal-basis morphological solutions for a restoration-based boundary-value problem

# publications[].label
Multiple Reaction Monitoring: Modeling and Systematic Analysis

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
BAGGING DEGRADES THE PERFORMANCE OF LINEAR DISCRIMINANT CLASSIFIERS

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Optimal intervention in semi-Markov-based asynchronous genetic regulatory networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Optimal and adaptive reconstructive granulometric bandpass filters

# publications[].label
MCMC implementation of the optimal Bayesian classifier for non-Gaussian models: model-based RNA-Seq classification.

# publications[].label
Performance of feature selection methods.

# publications[].label
Morphological paradigm for loss-function-based design of digital filters

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Multiresolution Design of Aperture Operators

# publications[].label
Noise factor analysis for cDNA microarrays.

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Optimal Bayesian Classification With Missing Values

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Optimal binary filters with linearly separable preprocessing

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Shape Analysis and Reduction of the Morphological Basis for Digital Moving-Average Filters

# publications[].publisher
Society for Industrial & Applied Mathematics (SIAM)

# publications[].label
Simulating microarrays using a parameterized model

# publications[].label
Non-homothetic granulometric mixing theory with application to blood cell counting

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Robust image processing language in the context of image algebra.

# publications[].label
Design of probabilistic Boolean networks under the requirement of contextual data consistency

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
STRUCTURAL INTERVENTION OF GENE REGULATORY NETWORKS BY GENERAL RANK-K MATRIX PERTURBATION

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Optimal Objective-Based Experimental Design for Uncertain Dynamical Gene Networks with Experimental Error.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Bayesian morphological peak estimation and its application to chromosome counting via fluorescence In situ hybridization

# publications[].label
Gene-expression profiles in hereditary breast cancer.

# publications[].label
Optimal Bayesian Classification With Vector Autoregressive Data Dependency

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Error Bounds for Morphologically Derived Measurements

# publications[].publisher
Society for Industrial & Applied Mathematics (SIAM)

# publications[].label
Intervention in a family of Boolean networks.

# publications[].label
Intrinsically fuzzy approach to mathematical morphology

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Exact representation of the second-order moments for resubstitution and leave-one-out error estimation for linear discriminant analysis in the univariate heteroskedastic Gaussian model

# publications[].label
Robust Identification of Molecularly Targeted Drug Effect Coefficient using $H_{infty}$ Filter

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Accuracy of differential expression detection with compressed microarray images

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Quality-Based Distance Measures and Applications to Clustering

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Optimal Experimental Design for Gene Regulatory Networks in the Presence of Uncertainty.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Exact MSE Performance of the Bayesian MMSE Estimator for Classification Error

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Gene clustering based on clusterwide mutual information.

# publications[].label
Boolean relationships among genes responsive to ionizing radiation in the NCI 60 ACDS.

# publications[].label
Intrinsically Optimal Bayesian Robust Filtering

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Is cross-validation better than resubstitution for ranking genes?

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Morphological measurement of surface roughness

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Queueing interpretation of adaptive reconstructive multiparameter -opening filters

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Multiresolution analysis for optimal binary filters

# publications[].label
Missing-value estimation using linear and non-linear regression with Bayesian gene selection.

# publications[].label
A systematic model of the LC-MS proteomics pipeline

# publications[].label
Preliminary study on bolstered error estimation in high-dimensional spaces

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
On the number of close-to-optimal feature sets.

# publications[].label
Bayesian Minimum Mean-Square Error Estimation for Classification Error-Part II: Linear Classification of Gaussian Models

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Multiscale denoising of biological data: a comparative analysis.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
The fundamental role of pattern recognition for gene-expression/microarray data in bioinformatics

# publications[].label
Effect of separate sampling on classification accuracy.

# publications[].label
Efficient switching algorithm for designing increasing binary filters

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Computation of morphological texture features for medical imaging applications

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
An experimental design to reduce dynamics uncertainty in genomic networks

# publications[].publisher
Association for Computing Machinery (ACM)

# publications[].label
Comparison of gene regulatory networks via steady-state trajectories.

# publications[].label
OPTIMAL CLASSIFIERS WITHIN A BAYESIAN FRAMEWORK

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
New training method for linear separable threshold Boolean filters

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Design of binary filters by sequential basis expansion

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Maximum-likelihood estimation for the two-dimensional discrete Boolean model using cross-windowed observations

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
What should be expected from feature selection in small-sample settings.

# publications[].label
Inferring connectivity of genetic regulatory networks using information-theoretic criteria.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Grand challenges for multimodal bio-medical systems

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
On the Number of Close-to-Optimal Feature Sets

# publications[].label
Binary filter estimation for large windows

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Erratum: (Nonlinear Image Processing IX (26-27 January 1998))

# publications[].label
Translational science: epistemology and the investigative process.

# publications[].label
Guest editorial - Genomic signal processing

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Reporting bias when using real data sets to analyze classification performance.

# publications[].label
Pixel Classification By Morphologically Derived Texture Features

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Noise-injected neural networks show promise for use on small-sample expression data.

# publications[].label
Erratum to: Efficient experimental design for uncertainty reduction in gene regulatory networks.

# publications[].label
Classification of Single-Cell Gene Expression Trajectories from Incomplete and Noisy Data.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
The coefficient of intrinsic dependence (feature selection using el CID)

# publications[].label
Iterative design of morphological binary image operators

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Maximum-likelihood estimation for the two-dimensional discrete Boolean random set and function models using multidimensional linear samples

# publications[].label
Modeling cyclic therapy in gene regulatory networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Multiresolution Bayesian design of binary filters

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Model-based characterization of statistically optimal design for morphological shape recognition algorithms via the hit-or-miss transform

# publications[].label
Dynamical Analysis of Drug Efficacy and Mechanism of Action Using GFP Reporters

# publications[].label
Optimal nonlinear filter in the random Boolean model

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
The reliability of estimated confidence intervals for classification error rates when only a single sample is available

# publications[].label
Automated analysis of multivariate nonlinear gene relations based on cDNA microarray expression data

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Optimal Intervention Strategies for Cyclic Therapeutic Methods with Fixed-Length Duration of Effect

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Identifying mechanistic similarities in drug responses.

# publications[].label
Incorporating biological prior knowledge for Bayesian learning via maximal knowledge-driven information priors.

# publications[].label
On the impoverishment of scientific education.

# publications[].label
Optimal number of features as a function of sample size for various classification rules.

# publications[].label
Optimal convex error estimators for classification

# publications[].label
Distribution of the pattern spectrum mean for convex base images

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Error Estimation for Pattern Recognition

# publications[].label
Intrinsically Bayesian robust classifier for single-cell gene expression trajectories in gene regulatory networks.

# publications[].label
Multiple-rule bias in the comparison of classification rules.

# publications[].label
Superior feature-set ranking for small samples using bolstered error estimation.

# publications[].label
Feature selection in the classification of high-dimension data

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Noninvasive stool-based detection of infant gastrointestinal development using gene expression profiles from exfoliated epithelial cells.

# publications[].label
Morphological granulometric simulation: distribution of the pattern-spectrum mean and variance for binary images with overlapping elements

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
On the Comparison of Classifiers for Microarray Data

# publications[].label
Ratio statistics of gene expression levels and applications to microarray data analysis.

# publications[].label
BPDA - a Bayesian peptide detection algorithm for mass spectrometry.

# publications[].label
Hybrid human-machine binary morphological operator design

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Information theoretic inference of direct gene regulation from time series data

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
The impact of function perturbations in Boolean networks.

# publications[].label
Adaptive reconstructive tau-openings: Convergence and the steady-state distribution

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Automatic counting of illuminated spheres in a random Boolean model

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
On reinforcement learning in genetic regulatory networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Efficient derivation of the optimal mean-square binary morphological filter from the conditional expectation via a switching algorithm for discrete power-set lattice

# publications[].label
Design of large-window binary filters via iteration

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Binary filter design: Optimization, prior information, and robustness

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Automatic programming of binary morphological machines by design of statistically optimal operators in the context of computational learning theory

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Causality, randomness, intelligibility, and the epistemology of the cell.

# publications[].label
Analysis and Control of Genetic Regulatory Systems with Switched Drug Inputs

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Optimizing consistency-based design of context-sensitive gene regulatory networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Euclidean gray-scale granulometries: Representation and umbra inducement

# publications[].label
Special Issue on Genomic Signal Processing FOREWORD

# publications[].label
On the sampling distribution of resubstitution and leave-one-out error estimators for linear classifiers

# publications[].label
Bayesian Multivariate Poisson Model for RNA-Seq Classification

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Optimal Bayesian Classification and Its Application to Gene Regulatory Networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Image segmentation by local morphological granulometries

# publications[].label
Efficient experimental design for uncertainty reduction in gene regulatory networks.

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Reducing confounding and suppression effects in TCGA data: an integrated analysis of chemotherapy response in ovarian cancer.

# publications[].label
Hybrid humanmachine binary morphological operator design. An independent constraint approach

# publications[].label
Intervention in gene regulatory networks via a stationary mean-first-passage-time control policy.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Performance of Error Estimators for Classification

# publications[].label
Identifying genes involved in cyclic processes by combining gene expression analysis and prior knowledge.

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
External control in Markovian Genetic Regulatory Networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Temporal inference of Probabilistic Boolean Networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
SENSITIVITY ANALYSIS FOR DRUG EFFECT STUDY: AN NF - kappa B PATHWAY EXAMPLE

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Optimal Dynamics Uncertainty Reduction in Gene Networks in the Presence of Experimental Error

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Bayesian Regression with Network Prior: Optimal Bayesian Filtering Perspective.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
CLASSIFICATION OF GAUSSIAN TRAJECTORIES WITH MISSING DATA IN BOOLEAN GENE REGULATORY NETWORKS

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Design and application of binary differencing filters

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Bayesian Minimum Mean-Square Error Estimation for Classification Error-Part I: Definition and the Bayesian MMSE Error Estimator for Discrete Classification

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Estimation of random-model parameters via linear systems with granulometric inputs

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Gene perturbation and intervention in probabilistic Boolean networks.

# publications[].label
Mean first-passage time control policy versus reinforcement-learning control policy in gene regulatory networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Cross-validation under separate sampling: strong bias and how to correct it.

# publications[].label
Microarray reveals differences in both tumors and vascular specific gene expression in de novo CD5+ and CD5- diffuse large B-cell lymphomas.

# publications[].label
Constructing Pathway-Based Priors within a Gaussian Mixture Model for Bayesian Regression and Classification.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
A COMPARATIVE STUDY ON SENSITIVITIES OF BOOLEAN NETWORKS

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Optimal Intervention Strategies for Therapeutic Methods With Fixed-Length Duration of Drug Effectiveness

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Optimal Bayesian Kalman Filtering With Prior Update

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Combination Therapy Design for Cancer: A Digital Systems Approach

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Network properties of intrinsically multivariate predictive genes

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Stochastic modeling of the relationship between copy number and gene expression based on transcriptional logic.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Inference of Boolean networks under constraint on bidirectional gene relationships.

# publications[].publisher
Institution of Engineering and Technology (IET)

# publications[].label
Rapid analysis of gene copy numbers by FISH and automated spot counting from stacked confocal images

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Small-sample precision of ROC-related estimates.

# publications[].label
Quantifying the Objective Cost of Uncertainty in Complex Dynamical Systems

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Statistics of the morphological pattern-spectrum moments for a random-grain model

# publications[].label
Asymptotic granulometric mixing theorem: Morphological estimation of sizing parameters and mixture proportions

# publications[].label
CONTROL-COMPATIBLE STATE REDUCTION FOR BOOLEAN NETWORKS

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
On the long-run sensitivity of probabilistic Boolean networks.

# publications[].label
Clustering analysis for gene expression data

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Epistemology of computational biology: Mathematical models and experimental prediction as the basis of their validity

# publications[].label
Representation of Linear Granulometric Moments for Deterministic and Random Binary Euclidean Images

# publications[].label
Detecting periodic genes from irregularly sampled gene expressions: a comparison study.

# publications[].label
Recovering genetic regulatory networks by integrating multiple data sources

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Parameter Estimation of Biological Phenomena Modeled by S-systems: An Extended Kalman Filter Approach

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Morphological pseudoconvolutions: One-parameter families of derived filters with increased invariant classes

# publications[].label
Optimal intervention strategies for cyclic therapeutic methods.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Design of optimal binary filters under joint multiresolution-envelope constraint

# publications[].label
Robust Intervention in Probabilistic Boolean Networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Learning Context-Specific Gene Regulatory Networks via In-Silico Conditioning

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
A Bayesian connectivity-based approach to constructing probabilistic gene regulatory networks.

# publications[].label
CLASSIFICATION PERFORMANCE ON A POPULATION WITH CONTEXTS

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
From Boolean to probabilistic Boolean networks as models of genetic regulatory networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Joint Sampling Distribution Between Actual and Estimated Classification Errors for Linear Discriminant Analysis

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
BOLSTERED ERROR ESTIMATOR WITH FEATURE SELECTION

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
State reduction for network intervention in probabilistic Boolean networks.

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Modeling temporal morphological systems via lattice dynamical systems

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Design of gray-scale nonlinear filters via multiresolution apertures

# publications[].label
Reduction mappings between Probabilistic Boolean networks

# publications[].label
Identification of diagnostic subnetwork markers for cancer in human protein-protein interaction network.

# publications[].label
Optimal Intervention in Asynchronous Genetic Regulatory Networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Constrained intervention in a cancerous mammalian cell cycle network

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Intrinsically Bayesian Robust Kalman Filter: An Innovation Process Approach

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Design Issues and Comparison of Methods for Microarray-Based Classification

# publications[].label
Effect of parameter variations on the inference of context-sensitive Probabilistic Boolean Networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Assessing the efficacy of molecularly targeted agents on cell line-based platforms by using system identification.

# publications[].label
Intervention in biological phenomena modeled by S-systems.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
SAMPLE SIZE CALCULATION FROM SPECIFIED RMS OF THE RESUBSTITUTION ERROR FOR LINEAR CLASSIFIERS

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
From biological pathways to regulatory networks.

# publications[].label
Adaptive design of logical structure filters

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Computationally Efficient Experimental Design Strategy for Reducing Gene Network Uncertainty

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Parametric design of nonlinear optimal filters

# publications[].label
Image restoration by multiresolution nonlinear filters

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Design and analysis of robust binary filters in the context of a prior distribution for the states of nature

# publications[].label
Classification with reject option in gene expression data.

# publications[].label
Identifying Drosophila cell-cycle regulated genes from irregular microarray data

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Construction of genomic networks using mutual-information clustering and reversible jump Markov-chain-Monte-Carlo predictor design

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Modeling genetic regulatory networks: Continuous or discrete?

# publications[].label
Segmentation of mammograms into distinct morphological texture regions

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Optimal filters with multiresolution apertures

# publications[].label
Ratio-based decisions and the quantitative analysis of cDNA microarray images.

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
A general axiomatic theory of intrinsically fuzzy mathematical morphologies

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Granulometric classifiers from small samples

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Inference of Boolean networks using sensitivity regularization.

# publications[].label
Characterization of drug efficacy regions based on dosage and frequency schedules.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Analysis of expression patterns: the scope of the problem, the problem of scope.

# publications[].label
Efficient Design of Minmax Odif Robust Stack Filters

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
UNCERTAINTY-BASED ESSENTIALITY IN GENE REGULATORY NETWORKS

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Computational Gray-scale Mathematical Morphology on Lattices (A Comparator-based Image Algebra) Part II: Image Operators

# publications[].label
Optimal Therapeutic Methods with Random-Length Response in Probabilistic Boolean Networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Optimal mean-absolute-error filtering of gray-scale signals by the morphological hit-or-miss transform

# publications[].label
Morphological slice-based counting of illuminated 3D bodies

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Asymptotic normality of the morphological pattern-spectrum moments and orthogonal granulometric generators

# publications[].label
Feature selection algorithms to find strong genes

# publications[].label
Fuzzification of set inclusion: Theory and applications

# publications[].label
Classifier performance as a function of distributional complexity

# publications[].label
Morphological texture analysis using the texture evolution function

# publications[].label
Effect of Separate Sampling on Classification and the Minimax Criterion

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
External control in Markovian Genetic Regulatory Networks

# publications[].label
Intervention in Biological Phenomena Modeled by S-Systems: A Model Predictive Control Approach

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Validation of gene regulatory networks: scientific and inferential.

# publications[].label
Granulometric size density for segmented random-disk models

# publications[].label
Classification of State Trajectories in Gene Regulatory Networks.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Linear granulometric moments of noisy binary images

# publications[].label
Analytical Study of Performance of Linear Discriminant Analysis in Stochastic Settings.

# publications[].label
Fibonacci thresholding, signal representation and morphological filters

# publications[].label
Identifying Genes Associated with Chemotherapy Response in Ovarian Carcinomas Based on DNA Copy Number and Expression Profiles

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Genornic signal processing: The salient issues

# publications[].label
Modeling genetic regulatory networks with probabilistic Boolean networks

# publications[].label
Mappings between probabilistic Boolean networks

# publications[].label
OPTIMAL CANCER THERAPY BASED ON A TUMOR GROWTH INHIBITION MODEL

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Control of stationary behavior in probabilistic Boolean networks by means of structural intervention

# publications[].label
A Systems Biology Approach in Therapeutic Response Study for Different Dosing Regimens-a Modeling Study of Drug Effects on Tumor Growth using Hybrid Systems.

# publications[].label
Growing genetic regulatory networks from seed genes.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Applying Reduction Mappings in Designing Genomic Regulatory Networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Real-time large-window binary filter design

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
A Bayesian Approach for Uncovering Gene Network Motifs

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
PATHWAY REGULATORY ANALYSIS IN THE CONTEXT OF BAYESIAN NETWORKS USING THE COEFFICIENT OF DETERMINATION

# publications[].label
Hole-spectrum representation and model-based optimal morphological restoration of binary images degraded by subtractive noise

# publications[].label
DIGITAL VERSION OF THE MATHERON REPRESENTATION THEOREM FOR INCREASING tau -MAPPINGS IN TERMS OF A BASIS FOR THE KERNEL.

# publications[].label
Pattern recognition theory in nonlinear signal processing

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Identification of combination gene sets for glioma classification.

# publications[].label
Robustness of intervention strategies for probabilistic Boolean networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Using structuring-element libraries to design suboptimal morphological filters

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Intervention in gene regulatory networks with maximal phenotype alteration.

# publications[].label
Nonlinear filtering and pattern recognition: Are they the same?

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Expression ratio statistics and its applications to microarray data analysis

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Application of the Bayesian MMSE estimator for classification error to gene expression microarray data.

# publications[].label
Spectral preprocessing for clustering time-series gene expressions.

# publications[].label
Document restoration and enhancement using optimal iterative and paired morphological filters

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Effect of Mixing Probabilities on the Bias of Cross-Validation Under Separate Sampling

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
BAYESIAN MMSE ESTIMATION OF CLASSIFICATION ERROR AND PERFORMANCE ON REAL GENOMIC DATA

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
THE EFFECT OF POPULATION CONTEXTS ON CLASSIFIER PERFORMANCE

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Discrete optimal Bayesian classification with error-conditioned sequential sampling

# publications[].label
Bayesian Robustness in the Control of Gene Regulatory Networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Validation of gene regulatory network inference based on controllability.

# publications[].label
A CoD-based stationary control policy for intervening in large gene regulatory networks.

# publications[].label
A CoD-based reduction algorithm for designing stationary control policies on Boolean networks.

# publications[].label
Coefficient of determination in nonlinear signal processing

# publications[].label
Validation of inference procedures for gene regulatory networks.

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
An Optimization-Based Framework for the Transformation of Incomplete Biological Knowledge into a Probabilistic Structure and Its Application to the Utilization of Gene/Protein Signaling Pathways in Discrete Phenotype Classification.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Assessing Combinational Drug Efficacy in Cancer Cells by Using Image-based Dynamic Response Analysis.

# publications[].label
Constrained Reduction Mapping for a Class of Network Models of Genomic Regulation

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Characterization of fuzzy Minkowski algebra

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Decorrelation of the true and estimated classifier errors in high-dimensional settings.

# publications[].label
Aperture filters: Theory, application, and multiresolution analysis

# publications[].label
Comparison of robust strategies for the control of gene regulatory networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
From Biological Pathways to Regulatory Networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Improved Branch-and-Bound Algorithm for U-Curve Optimization

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Control approaches for probabilistic gene regulatory networks

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Fuzzy adaptive Voronoi-diagram-based clustering of textured images

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Estimating conditional probabilities for the detection of unfavorable copy number alterations in a targeted therapy.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Granulometric parametric estimation for the random Boolean model using optimal linear filters and optimal structuring elements

# publications[].label
Application of image-based granulometry to siliceous and calcareous estuarine and marine sediments

# publications[].label
OPEN-LOOP FEEDBACK INTERVENTION: CONTROL OF GENE REGULATORY NETWORKS WITH UNMEASURABLE CONTEXT

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Optimal reconstructive tau-openings for disjoint and statistically modeled nondisjoint grains

# publications[].label
The peaking phenomenon in the presence of feature-selection

# publications[].label
Optimal restoration using the morphological hit-or-miss transform

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Analytic Study of Performance of Error Estimators for Linear Discriminant Analysis

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Recovering genetic regulatory networks from chromatin immunoprecipitation and steady-state microarray data.

# publications[].label
Fuzzy intervention in biological phenomena.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Generating stochastic gene regulatory networks consistent with pathway information and steady-state behavior.

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Research issues in genomic signal processing

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Boolean Kalman filter and smoother under model uncertainty

# publications[].publisher
SPIE, the international society for optics and photonics

# publications[].label
Gene selection: a Bayesian variable selection approach.

# publications[].label
Unification of nonlinear filtering in the context of binary logical calculus, part I: Binary filters

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# publications[].label
Application of Double Asymptotics and Random Matrix Theory in Error Estimation of Regularized Linear Discriminant Analysis

# publications[].publisher
Institute of Electrical and Electronics Engineers (IEEE)

# researcherOn[].label
Nutrition, Biostatistics and Bioinformatics Training Grant

# researcherOn[].awardedBy.label
National Institutes of Health - (Bethesda, Maryland, United States)

# researcherOn[].label
AEOLUS: Advances in Experimental Design, Optimal Control, and Learning for Uncertain Complex Systems

# researcherOn[].awardedBy.label
Brookhaven National Laboratory - (Upton, New York, United States)

# researcherOn[].label
NRT-DESE: Data-Enabled Discovery and Design of Energy Materials

# researcherOn[].awardedBy.label
National Science Foundation - (Arlington, Virginia, United States)

# researcherOn[].label
DMREF: Accelerating the Development of High Temperature Shape Memory Alloys

# researcherOn[].awardedBy.label
National Science Foundation - (Arlington, Virginia, United States)

# researcherOn[].label
Quantifying Performance for Classification based on Multi-Gene Dynamics Relative to the Number of Simultaneously Measured Live-Cell Expression Levels

# researcherOn[].awardedBy.label
Brookhaven National Laboratory - (Upton, New York, United States)

# streetAddress
Texas A&M University; Electrical Engineering; 3128 TAMU

# inTheNews[].label
Data, sustainability: ceding research advantages to China

# etdChairOf[].label
Zhao, Chen (2012-07). Stochastic Modeling and Analysis of Pathway Regulation and Dynamics. Doctoral Dissertation.

# etdChairOf[].label
Attoor, Sanju Nair (2004-11). Relationship between classifier performance and distributional  complexity for small samples. Master's Thesis.

# etdChairOf[].label
Dehghannasiri, Roozbeh (2016-08). Optimal Experimental Design in the Context of Objective-Based Uncertainty Quantification. Doctoral Dissertation.

# etdChairOf[].label
Atashpazgargari, Esmaeil (2014-08). Biomarker Discovery and Validation for Proteomics and Genomics: Modeling And Systematic Analysis. Doctoral Dissertation.

# etdChairOf[].label
Layek, Ritwik (2012-07). Pathways, Networks and Therapy: A Boolean Approach to Systems Biology. Doctoral Dissertation.

# etdChairOf[].label
Shahrokh Esfahani, Mohammad (2014-04). Using Prior Knowledge in the Design of Classifiers. Doctoral Dissertation.

# etdChairOf[].label
Rezaei Yousefi, Mohammadmahdi (2013-04). Optimal Intervention in Markovian Genetic Regulatory Networks for Cancer Therapy. Doctoral Dissertation.

# etdChairOf[].label
Zollanvari, Amin (2012-02). Analytic Study of Performance of Error Estimators for Linear Discriminant Analysis with Applications in Genomics. Doctoral Dissertation.

# etdChairOf[].label
Agyepong, Kwadwo (2012-10). Comparative Performance Analysis of the Algorithms for Detecting Periodically Expressed Genes. Master's Thesis.

# etdChairOf[].label
Zhao, Wentao (2009-05). Genomic applications of statistical signal processing. Doctoral Dissertation.

# etdChairOf[].label
Knight, Jason Matthew (2015-05). Optimal Model-Based Approaches for Predictive Inference in Biology. Doctoral Dissertation.

# etdChairOf[].label
Vahedi, Golnaz (2010-10). An Engineering Approach Towards Personalized Cancer Therapy. Doctoral Dissertation.

# etdChairOf[].label
Sun, Youting (2012-07). Model-based Biomarker Detection and Systematic Analysis in Translational Science. Doctoral Dissertation.

# etdChairOf[].label
Xiao, Yufei (2009-05). Boolean models for genetic regulatory networks. Doctoral Dissertation.

# etdChairOf[].label
Hsu, Fang-Han (2013-05). Copy Number and Gene Expression: Stochastic Modeling and Therapeutic Application. Doctoral Dissertation.

# etdChairOf[].label
Sima, Chao (2007-09). Small sample feature selection. Doctoral Dissertation.

# etdChairOf[].label
Dalton, Lori Anne (2012-07). Analysis and Optimization of Classifier Error Estimator Performance within a Bayesian Modeling Framework. Doctoral Dissertation.

# etdChairOf[].label
Ghaffari, Noushin (2012-07). Genomic Regulatory Networks, Reduction Mappings and Control. Doctoral Dissertation.