First name,Last name,Preferred title,Overview,Position,Department,Individual
Sing-Hoi,Sze,Associate Professor - Term Appoint,"Our work focuses on the application of computational techniques to solve problems in biology. Current research projects cover diverse areas in computational biology, including multiple sequence alignment, motif finding with applications to predicting transcription factor binding sites, biological network analysis, and identification of gene clusters within genomes.",Associate Professor - Term Appoint,Computer Science and Engineering,https://scholars.library.tamu.edu/vivo/display/n0248d9df
Susie,Dai,Associate Professor,"My research group is interested in evaluating environmental hazard substances, their interactions with the environment and species, and biological systems that can degrade and detoxify the pollutants. We have established broad analytical platforms to survey a wide spectrum of natural or man-made toxic chemicals such as mycotoxins, microcystins, agricultural, and industrial chemicals.
We integrate electrocatalysis/photoelectrocatalytic processes and material engineering with biological systems for 1) chemical degradation and 2) energy storage. Meanwhile, our laboratory has built a modern analytical tool suite, which includes mass spectrometry-based platforms for monitoring and surveillance, hydrogen-deuterium exchange mass spectrometry for protein structure dynamics analysis, and gel free mass spectrometry-based proteomics analysis. We develop qualitative and quantitative methods for molecular characterizations, protein analysis and proteomics when working in different environmental systems.",Associate Professor,Plant Pathology and Microbiology,https://scholars.library.tamu.edu/vivo/display/n27690618
Xiaoning,Qian,Associate Professor,"Xiaoning Qian's research interests include machine learning and Bayesian experimental design as well as their applications in computational network biology, genomic signal processing, and biomedical signal and image analysis. He is affiliated with the Center for Bioinformatics and Genomic Systems Engineering and the Center for Translational Environmental Health Research at Texas A&M.",Associate Professor,Electrical and Computer Engineering,https://scholars.library.tamu.edu/vivo/display/n2c8e24e9
Thomas,Ioerger,Professor - Term Appoint,"Dr. Ioerger's research interests are in the areas of Artificial Intelligence, Intelligent Agents, and Machine Learning. His work has covered diverse areas, from spatial reasoning, to simulating team-work, to modeling emotions. Currently, his primary focus is on designing multi-agent system architectures to simulate collaborative behavior and teamwork. He also applies AI and machine learning methods to various problems in the area of Bioinformatics, including the improvement of protein sequence alignments, molecular modeling, and X-ray crystallography. The latter research has lead to the development of an automated software system for protein model-building called TEXTAL, which is currently being used by crystallographers throughout the world.",Professor - Term Appoint,Computer Science and Engineering,https://scholars.library.tamu.edu/vivo/display/n36a51a43
Robert,Chapkin,Distinguished Professor,"Research in the Chapkin lab focuses on dietary/microbial modulators related to the prevention of cancer and chronic inflammatory diseases.
Our central goal is to (1) understand cancer chemoprevention at a fundamental level, and (2) to test pharmaceutical agents in combination with dietary/microbial (countermeasures to the Western diet) to more effectively improve gut health and reduce systemic chronic inflammation. Since diet influences gut microbiota composition and metabolite production, to unravel the interrelationships among gut health and the structure of the gut microbial ecosystem, we are in the process of evaluating (using transgenic mouse, Drosophila models and humans) how the gut microbiome modulates intestinal cells, innate immune cells and tumors. As part of this endeavor, we are modeling at the molecular level the dynamic relationship between diet and gut microbe-derived metabolites which modulate chronic inflammation and the hierarchical cellular organization of the intestine, e.g., stem cell niche.",Distinguished Professor||Professor,Biochemistry and Biophysics||Nutrition,https://scholars.library.tamu.edu/vivo/display/n3fbb59f8
Ivan,Ivanov,Clinical Professor,,Clinical Professor,Veterinary Physiology and Pharmacology,https://scholars.library.tamu.edu/vivo/display/n6fa588a3
Shuiwang,Ji,Professor,"Shuiwang Ji is currently an Associate Professor in the Department of Computer Science & Engineering, Texas A&M University, leading the Data Integration, Visualization, and Exploration (DIVE) Laboratory. Ji received the Ph.D. degree in Computer Science from Arizona State University in 2010, advised by Prof. Jieping Ye. His research interests include machine learning, data mining, and computational neuroscience. Ji received the National Science Foundation CAREER Award in 2014. He has authored over 80 research articles and has coauthored a book. Currently, Ji serves as an Action Editor for Data Mining and Knowledge Discovery, and an Associate Editor for ACM Transactions on Knowledge Discovery from Data, IEEE Transactions on Neural Networks and Learning Systems, and BMC Bioinformatics. Ji is a Program Chair for the 2017 Bioimage Informatics Conference and a senior member of IEEE.",Professor,Computer Science and Engineering,https://scholars.library.tamu.edu/vivo/display/n731c9f84
Yanan,Tian,Associate Professor,Transcriptional control of the Ah receptor-regulated gene expression. Interaction between the Ah receptor and NF-kB signal transduction pathways. lncRNAs and their role in regulation of gene expression,Associate Professor,Veterinary Physiology and Pharmacology,https://scholars.library.tamu.edu/vivo/display/n7f54d80b
Weston,Porter,Professor,y laboratory is interested in determining the role of factors in normal development and how disruption of these pathways results in associated pathologies.,Professor,Veterinary Integrative Biosciences,https://scholars.library.tamu.edu/vivo/display/n90e6f6c0
Vincent,VanBuren,Assistant Professor,,Instructional Assistant Professor,School of Medicine,https://scholars.library.tamu.edu/vivo/display/n98068f16
Ke,Zhang,Associate Professor,"Dr. Zhang's long-term goal is to decode genetic events and molecular interactions of biological processes, and rigorously represent the complex molecular behaviors with mathematical models. We use advanced high-throughput technology and robust stochastic models to obtain the systematic picture of a biological process. Multiple types of omics data, such as microarray, RNA-seq, ChIP-seq, lipidomics and proteomics are collected through innovative study designs in animals and humans, and are modeled for integrative analysis. Using embryonic mouse as a model system, one of our current focuses is to untangle the spatial and dynamic gene-gene interaction networks during heart development, and illustrate how environmental factors introduce adverse molecular changes and morphological defects. We are also investigating the transgenerational epigenetic variations carried from overweight mother to the offspring, and how the change of lifestyles would prevent childhood obesity.",Associate Professor||Associate Professor,Institute of Biosciences and Technology||Nutrition,https://scholars.library.tamu.edu/vivo/display/n9d8b0bca
Ivan,Rusyn,Professor,"My laboratory has an active research portfolio funded by the National Institutes of Health and the US EPA with a focus on the mechanisms of action of environmental toxicants and the genetic determinants of the susceptibility to toxicant-induced injury. Through a combination of in vivo animal studies and experiments that utilize cellular and molecular models, we aim to better understand why certain chemicals cause cancer or organ damage in rodents and whether humans in general, or any susceptible sub-population in particular, are at risk from similar exposures.
The main focus of our inter-disciplinary research is on improving the linkages between exposures and adverse health effects Specifically, we develop innovative experimental methods and computational tools which enable analysis of data across multiple dimensions including SNPs, -omic endpoints, multiple chemicals and traditional toxicity phenotypes.","Professor, Veterinary Physiology and Pharmacology",School of Veterinary Medicine and Biomedical Sciences,https://scholars.library.tamu.edu/vivo/display/nb3daa5ce
Ryland,Young,Professor,"Most bacterial viruses (phages) cause lysis of their host cell to release the progeny virions. Large phages elaborate an enzyme (""endolysin"") to degrade the cell wall and also a small membrane protein (""holin""). The holin accumulates in the membrane and then, at a precisely scheduled time, suddenly forms a hole to allow release of endolysin through the cytoplasmic membrane to gain access to the wall. We use molecular genetics and biochemistry to study how this small protein is able to act as a molecular ""clock"" and punch holes in membranes. Small phages make single proteins which cause host lysis in a different way. This strategy is to target the host cell wall synthesis machinery; that is, the virus makes a ""protein antibiotic"" that causes lysis in the same way as antibiotics like penicillin by inhibiting an enzyme in the multi-step pathway of murein biosynthesis. Thus, when the infected cell tries to divide, it blows up, or lyses, because it can't make the new cell wall between the daughter cells. Remarkably, each of three different, small phages blocks a different step in the pathway. These small lysis proteins are models for a completely new class of antibacterial antibiotics. Also, the E. coli SlyD protein is required for this mode of lysis in one case. SlyD is a member of an ubiquitous family of proteins related to human ""immunophilins,"" the targets of immune-suppression drugs. We study SlyD to learn about the role of this class of proteins in biology.",Professor,Biochemistry and Biophysics,https://scholars.library.tamu.edu/vivo/display/nea775348
Edward,Dougherty,Distinguished Professor,My research focuses on genomic signal processing and image analysis.,Distinguished Professor,Electrical and Computer Engineering,https://scholars.library.tamu.edu/vivo/display/nf4ef0ac5