First name,Last name,Preferred title,Overview,Position,Department,Individual
Karuppiah,Chockalingam,Research Assistant Professor,,Research Assistant Professor,Microbial Pathogenesis and Immunology,https://scholars.library.tamu.edu/vivo/display/n015218cf
Sarah,Bondos,Associate Professor,"My laboratory works in two research areas. First, we are combining biophysical and genetic approaches to understand how proteins use unstructured regions to sense cellular information and respond by adjusting their function. We developed methods to purify Ultrabithorax, a full-length, active Hox transcription factor, and have used this unique opportunity to investigate the role of intramolecular regulatory interactions in tissue-specific protein regulation. Second, we discovered methods to self-assemble Ultrabithorax into robust, extensible materials that are biocompatible and provide unique opportunities for functionalization. These materials are being developed for use as biosensors and to pattern and instruct vascularization in tissue engineering scaffolds.",,,https://scholars.library.tamu.edu/vivo/display/n18de9127
Artem,Rogovskyy,Associate Professor,,,,https://scholars.library.tamu.edu/vivo/display/n285dc10c
Thomas,Ioerger,Professor - Term Appoint,"Dr. Ioerger's research interests are in the areas of Artificial Intelligence, Intelligent Agents, and Machine Learning. His work has covered diverse areas, from spatial reasoning, to simulating team-work, to modeling emotions. Currently, his primary focus is on designing multi-agent system architectures to simulate collaborative behavior and teamwork. He also applies AI and machine learning methods to various problems in the area of Bioinformatics, including the improvement of protein sequence alignments, molecular modeling, and X-ray crystallography. The latter research has lead to the development of an automated software system for protein model-building called TEXTAL, which is currently being used by crystallographers throughout the world.",Professor - Term Appoint,Computer Science and Engineering,https://scholars.library.tamu.edu/vivo/display/n36a51a43
Luc,Berghman,Professor,"The hallmark of my research career is the development of novel antibodies and applying them toward the development of new immuno-biotechnological tools. My lab has developed an antibody discovery platform in chickens that goes from in silico sequence to epitope-specific chicken IgG (IgY) in less than 3 weeks based on in vivo CD40-targeted immunogen delivery.
Research projects include the study of the immune response in the chicken, especially the function of CD40-positive antigen presenting cells (such as the dendritic cells) in activating the humoral immune response and the development of chicken egg yolk antibodies, monoclonal antibodies and recombinant antibodies for diagnostic, prophylactic and therapeutic purposes. a Dr. Berghman was the recipient of the 2016 Zoetis Fundamental Science Award.",Professor||Professor,Poultry Science||Veterinary Pathobiology,https://scholars.library.tamu.edu/vivo/display/n3e016f20
Yinan,Wei,Professor,"We are interested in studying the interaction between microbes and host systems, in the context of antibiotic resistance, infection, and the innate immune response.",Professor,Pharmacy Practice,https://scholars.library.tamu.edu/vivo/display/n4bb89912
Paul,Straight,Associate Professor,"Our goal is to understand how microorganisms interact in complex communities. Specifically, we study how small molecules produced in a microbial community affect the growth, development and metabolic output of the organisms. We use a combination of microbiology, genetic, genomic, and biochemical approaches to dissect complex interspecies interactions. Currently, our research focuses on the interactions of the soil bacteria Bacillus subtilis and members of the genus Streptomyces, known for their prolific production of bioactive small molecules and development of aerial structures and spores.",Associate Professor,Biochemistry and Biophysics,https://scholars.library.tamu.edu/vivo/display/n5540637b
Jean-Philippe,Pellois,Professor,"Our goal is to determine how proteins function in space and time in the context of complex cellular networks. We focus on chemistry-driven approaches to manipulate protein structure beyond what is feasible with standard genetics. In particular, we use semi-synthetic light-activatable proteins as biophysical probes to investigate protein mechanisms inside living cells. Areas of interest include the important but poorly understood process of protein S-acylation, signal transduction, and protein trafficking.",Professor,Biochemistry and Biophysics,https://scholars.library.tamu.edu/vivo/display/n5815f42d
Wenshe,Liu,Bovay Chair and Professor in Chemistry,"Our research interest is to design methods for the genetic incorporation of noncanonical amino acids into proteins in living cells and apply these methods in three major directions: deciphering functions of protein posttranslational modifications, small molecule sensing, and expanding chemical diversities of phage display libraries. To study protein posttranslational modifications, we have constructed methods for the site-specific installation of lysine acetylation and methylation in proteins and will apply them to study functional roles of these two modifications on p53, a tumor suppressor protein. We have also developed a strategy to site-specifically install two noncanonical amino acids into one protein in E. coli and are applying this approach to construct biosensors for small organic molecules and metal ions. Phage display is an efficient method to identify peptides for therapeutic interventions. However, a phage display peptide library has limited structure motifs and functional groups because only 20 natural amino acids can be used to generate a library. We plan to expand the chemical diversity of a phage display library by incorporating multiple noncanonical amino acids and chemically modifying them to extend functional diversities. Screening this unnatural phage display library against therapeutic targets such as c-Abl tyrosine kinase is expected to identify highly potent inhibitors.",Professor,Chemistry,https://scholars.library.tamu.edu/vivo/display/n5d9506ea
Paul,de Figueiredo,Associate Professor,I have strong interests in elucidating the molecular mechanisms that mediate interactions between the intracellular bacterial pathogen Brucella spp. and host cells.,Associate Professor,Microbial Pathogenesis and Immunology,https://scholars.library.tamu.edu/vivo/display/n5e6f7b12
Keyan,Zhu Salzman,Professor,"Over millions of years of co-evolution with insects, plants have developed various defense machineries that can be activated in response to insect herbivory. Insects, in turn, have developed a variety of strategies to evade these plant defense mechanisms. An improved understanding of this complex plant defense and insect counter-defense relationship will facilitate development of better strategies to improve host plant defense. Currently, we are using Arabidopsis to study plant defense signal transduction pathways against insect pests. Meanwhile, since effectiveness of plant defense is also determined by the insect response, my laboratory is also investigating how insects adapt to the challenge of plant defense molecules, as well as to human imposed management strategies, and is working to identify new insect vulnerable systems.",Professor,Entomology,https://scholars.library.tamu.edu/vivo/display/n716ece47
Carlos,Gonzalez,Professor,Research in my laboratory encompasses a range of studies that address the genetics of virulence and pathogenicity. The model systems used in our studies are members of the Burkholderia Cepacia Complex (BCC) composed of nine species. The BCC are recognized as significant pathogens in cystic fibrosis patients. We are currently studying secretion systems responsible for export of a cytotoxic protein(s) in both B. cepacia (plant pathogen) and B. cenocepacia (human pathogen) to determine common mechanisms for pathogenicity. In addition we are conducting genomic analysis of BCC bacteriophage.,Professor,Plant Pathology and Microbiology,https://scholars.library.tamu.edu/vivo/display/n7a3b6b1f
Lisa,Campbell,Emerita Professor,My research focuses on phytoplankton population dynamics; harmful algal blooms and mechanisms of bloom formation; transcriptomics and metabolomics of marine dinoflagellates; ocean observing systems; and flow cytometry and imaging-in-flow cytometry.,Professor||Professor,Oceanography||Biology,https://scholars.library.tamu.edu/vivo/display/n7a7d6659
Arum,Han,Professor,"His research interests are in solving grand challenge problems in the broad areas of health and energy through the use of micro/nano systems technologies. His work in these areas has focused on the development of in vivo like in vitro systems through microfluidic lab-on-a-chip technologies (e.g., organ-on-a-chip & microphysiological systems, developmental neurobiology models of the central nervous system, blood-brain-barrier-on-a-chip, gastrointestinal tract-on-a-chip, high throughput live cell arrays), development of high throughput single-cell physio-chemical analysis platforms, and development of microbial systems as biorefineries for bioelectricity and biofuel production while simultaneously utilizing wastewater.
He has co-authored more than 80 peer-reviewed publications and has received funding from the Bill and Melinda Gates Foundation, National Institutes of Health (NIH), National Science Foundation (NSF), Defense Threat Reduction Agency (DTRA), United States Department of Agriculture (USDA), U.S. Army Corp of Engineers, Qatar National Research Foundation (QNRF), and several other international sponsors and private companies. He currently serves as the editorial board member of the journal PLoS ONE and as an associate editor for the journal Biomedical Microdevices.",Professor||Faculty Affiliate,Energy Institute||Electrical and Computer Engineering,https://scholars.library.tamu.edu/vivo/display/n8289e950
James,Sacchettini,Professor,"My lab uses X-ray crystallography to better understand the relationship between proteins and ligands. Tiny differences in the structure of a molecule can radically change the interaction between a protein and ligand and we are only begining to understand how many factors play a role in this interaction. By manipulating the individual components of a compound it is possible to create a chemical that binds to the protein better than the natural substrate, and prevent the natural reaction from occurring. This is the basis for rational drug design. Our efforts have lead us to collaborations with other labs and scientists in many disciplines as our approach to directed compound design has applications not only in basic research but also in pesticide development, health research and clinical research.",Professor,Biochemistry and Biophysics,https://scholars.library.tamu.edu/vivo/display/n90385563
Hisashi,Koiwa,Professor,,Professor,Horticultural Sciences,https://scholars.library.tamu.edu/vivo/display/n931bc4cc
Frank,Raushel,Distinguished Professor,"Enzymes catalyze a remarkable variety of chemical reactions with extremely high rate enhancements and very selective substrate specificity. The research efforts in our laboratory are directed towards a more complete understanding of the fundamental principles involved in enzyme-catalyzed chemistry and the dependence on protein structure. The pursuit of this information will provide the framework for the rational and combinatorial redesign of these complex molecules in an effort to exploit and develop the properties of enzyme active sites for a variety of chemical, biological, and medicinal uses. The techniques that we are using to solve these problems include steady-state and stopped-flow kinetics, NMR and EPR spectroscopy, X-ray crystallography, and the synthesis of inhibitors and suicide substrates. We are also using recombinant DNA methods to construct new proteins with novel catalytic properties. These efforts are currently being directed to the reactions catalyzed by phosphotriesterase and enzymes involves in the degradation of lignin and the metabolism of novel carbohydrates from the human gut microbiome.
The phosphotriesterase enzyme catalyzes the hydrolysis of organophosphate insecticides and other toxic organophosphate nerve agents. We have discovered that the active site of this protein consists of a unique binuclear metal center for the activation of water. We are now investigating the structure and properties of this metal center as a model system for the evolution of enzyme structure and function. Toward this end we have mutated the active site of this enzyme in a research project to create novel enzymes with the ability to detect, destroy, and detoxify various chemical warfare agents such as sarin, soman, and VX. The Raushel laboratory is also engaged in a large scale research project that is focused on the development of novel strategies for the discovery of new enzymes.",Distinguished Professor,Chemistry,https://scholars.library.tamu.edu/vivo/display/na84f2fec
Lisa,Perez,Director for Advanced Computing Enablement,,Associate Director,Texas A&M High Performance Research Computing,https://scholars.library.tamu.edu/vivo/display/naf9f7163
Sang Jin,Suh,Associate Professor,"There are several research foci in the Suh laboratory. First, we are interested in elucidating and understanding the molecular mechanisms involved in the survival of pathogenic bacteria in nature and the contribution of these mechanisms to aid these pathogens in their ability to cause human diseases.
Second, we are interested in developing peptide based biosensors for rapid detection of important bacterial pathogens. Our biosensors can detect pathogens in just minutes rather than hours or days of other approaches. Third, we are interested in genetic and metabolic engineering to develop bacterial cells into microbial factory for optimal production of value-added products.",Associate Professor,Biomedical Sciences,https://scholars.library.tamu.edu/vivo/display/nb2c8b3d4
Kevin,Burgess,Professor,"We use novel strategies Exploring Key Orientations (EKO) that feature datamining to compare simulated preferred conformers of chemotypes we design with key features at protein-protein interfaces. Many chemotype candidates can be screened against one PPI, or one chemotype can be screened against all the PPI interfaces in the PDB. Virtual hit chemotypes are prepared in my lab, then tested against protein-protein interactions of biomedicinal interest using an array of biophysical and cellular assays.
We also design small molecules to target cell surface receptors that are selectively overexpressed in cancer cells. Much or our work has been focused on the TrkC receptor that is particularly important to metastatic breast cancer and melanoma. Going forwards we are interested in expanding the targets to include cell surface receptors that are overexpressed when cancer cells undergo aberrant epithelial to mesenchymal transitions (EMT) to produce circulating tumor cells and cancer stem cells. Much of this work involves design and synthesis of the small molecules for this targeting.",Professor,Chemistry,https://scholars.library.tamu.edu/vivo/display/nc4a5cad4
Zhilei,Chen,Associate Professor,"The Chen Medicinal Protein Lab aims to accelerate the discovery, development and clinical translation of protein therapeutics through innovative protein engineering research. We believe that better medicine enables a higher quality of living, and protein engineers are charged to create the better medicine for today and tomorrow. We are particularly interested in the creation and engineering of affordable protein therapeutics to prevent and treat infectious diseases and cancer.",Associate Professor,Microbial Pathogenesis and Immunology,https://scholars.library.tamu.edu/vivo/display/nc9a6c3ae
Shiqing,Xu,Assistant Professor,"Our research aims to develop innovative synthetic methodologies and therapeutic approaches, and apply them to solving pressing problems of biological and medical importance. New synthetic methodologies and strategies (e.g. non-traditional disconnections and C-H functionalization) have great impacts on the discovery of transformational medicines by enabling the rapid and efficient synthesis of novel, diverse, and complex biologically active molecules. New therapeutic approaches (e.g. targeted covalent inhibition and targeted protein degradation) provide new opportunities to address traditionally ""undruggable"" disease targets.
We anticipate that the combination of the efforts in the development of novel synthetic methodologies and therapeutic approaches will advance drug discovery in diseases of unmet need, and achieve the research goal of identifying small-molecule probes and drug candidates that specifically remove/inhibit disease-causing proteins in cells and animal models and ultimately impact human health. Representative research directions include:
1. COVID-19 drug discovery via small-molecule-induced targeted protein inhibition and degradation
2. Late-stage functionalization of drugs and peptides & its applications in drug discovery
3. Organoboron chemistry and its medical applications",Assistant Professor,Chemistry,https://scholars.library.tamu.edu/vivo/display/ncd983c6e
David,Caldwell,Professor and Head,,Professor||Professor and Head,"Poultry Science||Rangeland, Wildlife and Fisheries Management||Wildlife and Fisheries Sciences",https://scholars.library.tamu.edu/vivo/display/nea632206
Anurag,Purushothaman,Research Assistant Professor,,Research Assistant Professor,Biomedical Engineering,https://scholars.library.tamu.edu/vivo/display/neca091da
Magnus,Hook,Professor,"The primary interest of our laboratory is to try to understand the structural function of the extracellular matrix. Of particular interest is the study of the molecular mechanisms of microbial adhesion to host tissue. This process, which is believed to represent a critical initial step in the development of infections, involves specific cell-surface proteins that recognize and bind with a high affinity to components in the host tissue. Our goal is to decipher these events at a molecular level and, based on structural analysis of the interacting components, design new strategies to prevent and treat infections.",Regents & Distinguished Professor and Director,Center for Infectious and Inflammatory Diseases,https://scholars.library.tamu.edu/vivo/display/nfd8d37d6