First name,Last name,Preferred title,Overview,Position,Department,Individual
Zhilong,Yang,Associate Professor,"The overarching research goal of the Yang laboratory is to understand the mechanisms governing viral replication, with the rationale that the discoveries will expand the knowledge of both viruses and their hosts, and facilitate the development of novel strategies to combat viral and non-viral diseases. A parallel goal of Yang lab is to provide a highly supportive environment to train the next generations of scientists. The ongoing research focuses on how viruses interact with two cellular housekeeping processes: protein synthesis and metabolism using vaccinia virus as the research model. Vaccinia virus is the prototype poxvirus. Poxviruses significantly impact public health, with many presently causing morbidity and mortality in humans and many economically important animals, including deadly zoonotic pathogens (e.g., monkeypox virus). In addition, despite the eradication of smallpox, one of the most (if not the most) devastating diseases in human history, smallpox resurgence remains a serious biothreat. Poxviruses are also widely developed as veterinary and human vaccine vectors and as cancer treatment agents. Poxviruses provide numerous precious tools to understand many aspects of cell biology and dissect complex life processes, as their large DNA genomes encode hundreds of genes that engage many key nodes of cellular life. Yang's research integrates biochemical, molecular, and omics approaches. Taking advantage of their in-depth knowledge of the poxvirus replication and virus-host interactions, the Yang lab also develops vaccinia virus-based utilities and anti-virals.",Associate Professor,Veterinary Pathobiology,https://scholars.library.tamu.edu/vivo/display/n02daa01b
Gregory,Reeves,Associate Professor,,Associate Professor,Chemical Engineering,https://scholars.library.tamu.edu/vivo/display/n05d3cae9
Yi,Xu,Associate Professor,"Our current research activities focus on understanding the pathogenic mechanism of Streptococcus gallolyticus subsp. gallolyticus (Sgg). Sgg is a gram-positive opportunistic pathogen that causes life-threatening bacteremia and infective endocarditis (IE). It is also strongly associated with colorectal cancer (CRC). My lab was the first to demonstrate that Sgg actively promotes the development of colon tumors, elevating a long-stranding clinical association to a functional causal role of Sgg in tumor development. Despite its medical importance, the pathogenic mechanism of Sgg remains poorly understood. Our recent studies have demonstrated that a type VII secretion system of Sgg plays a key role in pathogenesis. Currently we are interested in understanding the mechanism underlying following key steps in Sgg pathogenesis: 1) colonization of the intestinal epithelium, 2) modulation of intestinal homeostasis in normal and tumor-bearing colons, and 3) dissemination from the gastrointestinal tract to the circulatory system.
Keywords: bacterial pathogenesis, infectious diseases, virulence, colorectal cancer, microbiome, microbiota, type VII secretion system, gastrointestinal tract",Associate Professor,Institute of Biosciences and Technology,https://scholars.library.tamu.edu/vivo/display/n0c22439a
Timothy,Devarenne,Associate Professor,"We study the biochemical and molecular mechanisms underlying the control of programmed cell death (PCD) in plants and how PCD is manipulated during plant-pathogen interactions. Specifically we study the interaction between tomato and Pseudomonas syringae pv. tomato (Pst) the causative agent of bacterial spot disease. Resistance to this disease is conferred by the host Pto serine/threonine protein kinase which recognizes Pst strains expressing the type III effector protein AvrPto.
PCD is induced during both resistant and susceptible plant-pathogen interactions. In the case of a resistant interaction, PCD induced by the plant, known as the hypersensitive response (HR), and acts to limit the spread of the pathogen. In susceptible plant-pathogen interactions plant PCD is induced by the pathogen after infection leading to death of the host. Studies have indicated that the genes controlling host PCD during the HR are the same genes that are manipulated by the pathogen during susceptible interactions. The difference lies in the timing of controlling the activity of these genes; HR PCD occurs within 12 hours of pathogen recognition while pathogen-induced PCD occurs several days after infection.
Many of these genes that control plant PCD are serine/threonine (S/T) protein kinase. We are interested in studying a specific class of S/T protein kinases that control PCD in plants called AGC kinases and how they are regulated in both resistant and susceptible plant-pathogen interactions. Additionally, when plants are not attacked by pathogens, PCD is a process that requires constant control so that cell death does not occur. We are looking at the signaling mechanisms and pathways employed to keep PCD under check in non-pathogen challenged plants.",Faculty Affiliate||Associate Professor,Energy Institute||Biochemistry and Biophysics,https://scholars.library.tamu.edu/vivo/display/n11411275
Michael,Golding,Associate Professor,,Associate Professor,Veterinary Physiology and Pharmacology,https://scholars.library.tamu.edu/vivo/display/n19ac3c74
Tatyana,Igumenova,,"My laboratory is broadly interested in understanding the structural basis of signal transduction events that occur at the membrane surface. These events are mediated by signaling proteins that reversibly associate with membranes in response to binding second messengers, such as Ca2+ ions, diacylglycerol, and phosphoinositides. One of the key kinases regulating these signal transduction pathways is the Protein Kinase C (PKC) family. Aberrant levels of PKC expression or activity have been implicated in a large number of human diseases, such as cancer, cardiac failure, Alzheimer's disease, and diabetes. Despite the significance of PKC in signal transduction and human health, the structural and dynamical basis of its activation upon binding to lipid membranes remains elusive.",Associate Professor,Biochemistry and Biophysics,https://scholars.library.tamu.edu/vivo/display/n1c6e6632
Kayla,Bayless,Associate Professor,"My laboratory conducts research in two areas of molecular and cellular medicine: the mechanism through which primary human endothelial cells invade into 3D matrices, and communication between invading endothelial cells and their surrounding 3D collagen matrix.",Associate Professor,Cell Biology and Genetics,https://scholars.library.tamu.edu/vivo/display/n1dd3799c
Xiuren,Zhang,Professor,"Our laboratory focuses on systemic analysis of biochemical, molecular and biological functions of AGO family proteins (AGOs-mics) in genetically tractable Arabidopsis and economically important crops (i.e. rice). We'd like to identify the small RNAs, mRNA targets and protein components which associate with these AGOs. We will study protein/RNA and protein/protein interactions in these RISC assembly events. Our goal is to understand how these AGOs are functionally specialized or redundant corresponding to endogenous development cues and external environmental stimuli. Particularly, we'd like to learn how plants reprogram their gene expression through the small RNAs and AGOs to construct a new cellular niche in responses to environmental challenges and biotic stresses.
Another aspect of our research involves host/virus interaction. Plants take advantage of RNA silencing pathways to defend themselves from exogenous nucleic acid invaders (i.e. viruses). As an anti-host defense mechanism, viruses encode suppressors that can block RNA silencing responses. We have recently demonstrated that CMV 2b disables AGO1 cleavage activity to inhibit RNA silencing and to counter host defense. We are now extending our study to suppressors of several other viruses and the molecular mechanisms of their suppression.",Associate Professor,Biochemistry and Biophysics,https://scholars.library.tamu.edu/vivo/display/n220933ad
Susie,Dai,Associate Professor,"My research group is interested in evaluating environmental hazard substances, their interactions with the environment and species, and biological systems that can degrade and detoxify the pollutants. We have established broad analytical platforms to survey a wide spectrum of natural or man-made toxic chemicals such as mycotoxins, microcystins, agricultural, and industrial chemicals.
We integrate electrocatalysis/photoelectrocatalytic processes and material engineering with biological systems for 1) chemical degradation and 2) energy storage. Meanwhile, our laboratory has built a modern analytical tool suite, which includes mass spectrometry-based platforms for monitoring and surveillance, hydrogen-deuterium exchange mass spectrometry for protein structure dynamics analysis, and gel free mass spectrometry-based proteomics analysis. We develop qualitative and quantitative methods for molecular characterizations, protein analysis and proteomics when working in different environmental systems.",Associate Professor,Plant Pathology and Microbiology,https://scholars.library.tamu.edu/vivo/display/n27690618
Xiaoning,Qian,Associate Professor,"Xiaoning Qian's research interests include machine learning and Bayesian experimental design as well as their applications in computational network biology, genomic signal processing, and biomedical signal and image analysis. He is affiliated with the Center for Bioinformatics and Genomic Systems Engineering and the Center for Translational Environmental Health Research at Texas A&M.",Associate Professor,Electrical and Computer Engineering,https://scholars.library.tamu.edu/vivo/display/n2c8e24e9
Natalie,Johnson,Associate Professor,"My research focuses on evaluating exposure to air pollutants in susceptible populations, such as pregnant women and children, and investigating mechanisms underlying prenatal air pollution exposure and offspring respiratory dysfunction.",Associate Professor,Environmental and Occupational Health,https://scholars.library.tamu.edu/vivo/display/n2d4035f8
Alistair,McGregor,Associate Professor,"Our lab studies various herpesviruses but the major focus of our research is on the study of cytomegalovirus (CMV) which is a common pathogen that establish a life long infection in a mainly latent state. CMV causes disease in transplant patients and is a leading cause of congenital disease in newborns where the virus crosses the placenta and infects the fetus in utero. Congenitally infected newborns can have severe disease that causes cognitive impairment, hearing loss and vision problems. There is no vaccine against congenital CMV and our research seeks to understand the disease and develop interventions strategies.",Associate Professor,Microbial Pathogenesis and Immunology,https://scholars.library.tamu.edu/vivo/display/n3de7f8e8
Gonzalo,Rivera,Associate Professor,"My laboratory is interested in the role played by cytoskeletal remodeling in development and disease, particularly, angiogenesis and tumor progression and invasion. The long-term goal of our research is to understand how extracellular signals that alter tyrosine phosphorylation and the metabolism of inositol phospholipids modulate actin dynamics and cell motility. Areas of interest include the biogenesis of actin-based structures of invasion, intracellular trafficking, and three-dimensional tissue morphogenesis in vitro. Our research employs a combination of molecular genetics, cell biology, proteomics, and high-resolution optical imaging.",Associate Professor,Veterinary Pathobiology,https://scholars.library.tamu.edu/vivo/display/n47ddea15
Arthur,Laganowsky,Associate Professor,"A long-term research goal of our group is to determine the molecular basis behind protein-lipid interactions and how these interactions can modulate the structure and function of membrane proteins, including their interactions with signaling molecules. What determines the selectivity of membrane proteins towards lipids, and the coupling between lipid binding events and function remains a key knowledge gap in the field; one that if addressed will significantly advance our understanding of how lipids participate in both normal and pathophysiological processes of membrane proteins. Therefore, there is a critical need to expand our fundamental knowledge in this emerging field by applying and developing innovative approaches to elucidate how lipids modulate the structure function of membrane proteins. To this end, we are studying a number of ion channels, receptors and other types of membrane proteins.",Associate Professor,Chemistry,https://scholars.library.tamu.edu/vivo/display/n542411e4
Mahua,Choudhury,Associate Professor,"Epigenetics, diabetes, obesity, pregnancy, preeclampsia, biomarker",Associate Professor,Nutrition,https://scholars.library.tamu.edu/vivo/display/n55b81876
Phanourios,Tamamis,Assistant Professor,,Associate Professor,Chemical Engineering,https://scholars.library.tamu.edu/vivo/display/n5673e0c8
Narendra,Kumar,Associate Professor,"1. Obesity associated metabolic syndrome (MetS) is both a US and a worldwide epidemic and a major burden to healthcare system. Chronic low-grade inflammation (CLGI) is a well-established characteristic of the obese-human condition and though, the gastrointestinal (GI) mucosa is the first tissue that interacts with dietary components and luminal microbiota both of which are known to regulate obesity, the research on the role of GI-mucosa in obesity associated MetS is lacking. Findings from my lab support a key role of Janus kinase 3 (Jak3), a non-receptor tyrosine kinase, in intestinal and systemic CLGI associated obesity and diabetes in both an animal-model and in humans. Our publications, and unpublished data indicate that Jak3 regulates; colonic and systemic CLGI, and multiple symptoms of metabolic syndrome. Our goal is to determine the associated underlying mechanisms. Our current focus is on tissue-specific roles of Jak3 and associated signaling complexes in CLGI-onset as a precursor for; (a) obesity and diabetes, (b) Obesity and Alzheimer's disease, and (c) inflammatory bowel disease.
2. Inflammatory bowel disease (IBD) that includes Crohn's disease and Ulcerative colitis is a chronic inflammatory condition of gastrointestinal tract. Annual death from these diseases are over 70,000.00, and the incidences of new cases have been rising over the years. Because the repairs of intestinal mucosa (Restitution) are compromised during IBD, the research focus of our lab is to dissect the roles of intestinal epithelial, intestinal immune cells and gut microbiota in mucosal restitution. Our lab was pioneered the functions of Jak3 in intestinal epithelial mucosa. We show that IL-2 (a cytokine produced during intestinal inflammation) promotes mucosal wound repair through Jak3 complexed with villin, ShcA, and ?-catenin. Studies are underway to define the tissue-specific Jak3-mediated signaling pathways that regulate CLGI as a precursor for the onset of IBD.",Associate Professor and Director of Graduate Studies||Associate Professor,Pharmaceutical Sciences||Pharmaceutical Sciences,https://scholars.library.tamu.edu/vivo/display/n5bcfc45e
Kevin,Myles,Professor,,Associate Professor,Entomology,https://scholars.library.tamu.edu/vivo/display/n5d73717b
Allen,Honeyman,Associate Professor,,Associate Professor,Biomedical Sciences,https://scholars.library.tamu.edu/vivo/display/n62788a8f
Gary,Kunkel,Associate Professor,"An important step to control the amount of RNA or protein in particular types of cells is at the level of transcription of genes. Our lab studies a multifunctional vertebrate transcriptional activator protein known as SBF/Staf/ZNF143. This protein binds to SPH sites within promoters of many genes that produce small stable RNAs (e.g., snRNAs and others) PLUS probably over 2000 promoters of genes that produce mRNAs. Two separate activation domains in this protein direct its action at small RNA vs. mRNA gene promoters. We are using zebrafish as a vertebrate model organism to study the roles of SBF/Staf during development. In vivo studies are coupled with biochemical and molecular biology methods to decipher the mechanisms by which this protein stimulates transcription of various types of genes.",Associate Professor,Biochemistry and Biophysics,https://scholars.library.tamu.edu/vivo/display/n638b96b2
Joseph,Kwon,Associate Professor and holder of the Kenneth R. Hall Career Development Professorship,,Associate Professor||Faculty Affiliate,Energy Institute||Artie Mcferrin Department of Chemical En,https://scholars.library.tamu.edu/vivo/display/n680c5a23
Shaunna,Clark,Associate Professor,"Dr. Clark's research seeks to understand how biological and environmental factors shape substance use and addiction. Specifically, the lab focuses on the role of genetics and epigenetics in the etiology of substance use and addiction and identifying (epi)genetic biomarkers. This line of research will eventually lead to the improvement of diagnosis, prognosis and treatment of substance addiction and its related health effects. We approach these research questions using a translational framework that incorporates both human and animal studies, big data, and advanced statistical modeling techniques.",Associate Professor,Psychiatry and Behavioral Sciences,https://scholars.library.tamu.edu/vivo/display/n69871e1f
Junjie,Zhang,Associate Professor,"The living cell contains a collection of molecular machines to grow and function. These machines include the ribosomes, the chaperons, the proteasomes and other enzymes. Malfunction of these machines, if occurred in human, are related to many diseases. Understanding their three-dimensional (3D) structures is essential to understand how these machines work in the cell and eventually to treat those related diseases.
Here we use an experimental technique called cryo-electron microscopy (cryo-EM) to image these cellular machines in their native environment at liquid nitrogen temperatures. We then use image processing and graphics techniques to visualize their 3D structures, answering the questions such as how they assemble and how they interact with each other.
In addition, we develop computational modeling tools to interpret and animate these obtained 3D structures to further describe their movements and dynamics.",Associate Professor,Biochemistry and Biophysics,https://scholars.library.tamu.edu/vivo/display/n701e163f
Xu,Peng,Associate Professor,"Our long-term goal is to explore and define novel genetic mechanisms that are involved in cardiovascular disease which can ultimately translate into potential strategies for its treatment. To achieve this goal, we will use a comprehensive approach including mouse genetics and molecular and cellular biology methods to explore the mechanisms involved in the regulation of cardiovascular development and disease.",Associate Professor,Medical Physiology,https://scholars.library.tamu.edu/vivo/display/n78b50f7c
Yanan,Tian,Associate Professor,Transcriptional control of the Ah receptor-regulated gene expression. Interaction between the Ah receptor and NF-kB signal transduction pathways. lncRNAs and their role in regulation of gene expression,Associate Professor,Veterinary Physiology and Pharmacology,https://scholars.library.tamu.edu/vivo/display/n7f54d80b
John,Ford,Associate Professor,,Associate Professor,Nuclear Engineering,https://scholars.library.tamu.edu/vivo/display/n83d50875
Jay,Groppe,Associate Professor,,Associate Professor,Biomedical Sciences,https://scholars.library.tamu.edu/vivo/display/n93572b3e
Andreea,Trache,Associate Professor,"The research in my laboratory focuses on the study of cellular responses to mechano-chemical stresses from a biophysical perspective. Biophysics research represents an applied field of science at the interface of physics, biology, engineering, and medicine. Our lab uses live vascular cells as a model system because endothelial and smooth muscle cells reside 'in vivo' in a mechanically active environment that is continuously changing. Using real-time imaging of live cells is the only way to directly monitor cellular responses to mechano-chemical stimulation. Moreover, single-cell imaging experiments allow discrete measurements of transient microscopic events that may be masked by a macroscopic average behavior, and will aid in understanding such behavior.",Associate Professor,Medical Physiology,https://scholars.library.tamu.edu/vivo/display/n955af1bf
Fei,Liu,Associate Professor,"Our laboratory conducts research in:
1. The characterization and application of standardized mesenchymal stem cells (MSCs) derived from iPS cells and their extracellular vesicles (EVs). Current application focuses on treating diseases caused by over-activation of immune system, such as Sjogren's syndrome, an autoimmune disease causing dry eyes and dry mouth, and cytokine storm caused by infections.
2. Roles of tissue-resident macrophages in the development, homeostasis, and regeneration of salivary glands damaged by radiation therapy for cancer.",Associate Professor,Cell Biology and Genetics,https://scholars.library.tamu.edu/vivo/display/n9732f08e
Hung-Jen,Wu,Associate Professor,"Dr. Wu uses nanostructured materials and analytical tools to develop diagnostic techniques for medical applications. His laboratory recently focuses on understanding the influences of multivalency and cell membrane environment on pathogen-host cell recognition. The applications of his techniques include, infectious diseases screening, exploring cell membrane function, and targeted drug delivery.",Associate Professor,Chemical Engineering,https://scholars.library.tamu.edu/vivo/display/n9cbcca3e
Kranthi,Mandadi,Associate Professor,"World-wide, pathogens, insects and abiotic stresses cause major losses to agricultural production and productivity. Our lab employs integrated approaches for basic and translational studies of crop stress responses in model and crops. We are using the latest genomics, genetics, and bioinformatics tools to study plant stress responses to diverse plant biotic and abiotic stress conditions, as well as enhance their stress tolerance using biotechnology and breeding tools.",Associate Professor||Associate Professor,Plant Pathology and Microbiology||Texas A&M AgriLife Research,https://scholars.library.tamu.edu/vivo/display/nb05fab89
David,Reiner,Associate Professor,he Reiner lab research is divided into two general areas: mechanisms of cell signaling and harnessing model genetic organisms for drug discovery and translational biology.,Associate Professor,Institute of Biosciences and Technology,https://scholars.library.tamu.edu/vivo/display/nb2849771
Sang Jin,Suh,Associate Professor,"There are several research foci in the Suh laboratory. First, we are interested in elucidating and understanding the molecular mechanisms involved in the survival of pathogenic bacteria in nature and the contribution of these mechanisms to aid these pathogens in their ability to cause human diseases.
Second, we are interested in developing peptide based biosensors for rapid detection of important bacterial pathogens. Our biosensors can detect pathogens in just minutes rather than hours or days of other approaches. Third, we are interested in genetic and metabolic engineering to develop bacterial cells into microbial factory for optimal production of value-added products.",Associate Professor,Biomedical Sciences,https://scholars.library.tamu.edu/vivo/display/nb2c8b3d4
Sakiko,Okumoto,Associate Professor,"The overall goal of my research is to understand how nitrogen (N), quantitatively the most important nutrient in crops, is managed in plants. Specifically, my research aims at how amino acids, one of the main forms of organic N in plant body, is transported. In order to study such mechanisms in detail, we have developed protein-based, fluorescent sensors that allow us to track amino acids in live cells. We utilize these sensors to discover novel molecular mechanisms that are involved in the regulation of amino acids. We are currently interrogating the processes in which amino acid exporters are involved in, using various genetic resources such as T-DNA insertion mutants and gene editing tools. We are also interested in developing novel sensors for other biologically important molecules.",Associate Professor,Soil and Crop Sciences,https://scholars.library.tamu.edu/vivo/display/nc97dd3d8
Zhilei,Chen,Associate Professor,"The Chen Medicinal Protein Lab aims to accelerate the discovery, development and clinical translation of protein therapeutics through innovative protein engineering research. We believe that better medicine enables a higher quality of living, and protein engineers are charged to create the better medicine for today and tomorrow. We are particularly interested in the creation and engineering of affordable protein therapeutics to prevent and treat infectious diseases and cancer.",Associate Professor,Microbial Pathogenesis and Immunology,https://scholars.library.tamu.edu/vivo/display/nc9a6c3ae
Yun,Huang,Associate Professor,"Dr. Huang is currently an Assistant Professor at the Center for Epigenetics and Disease Prevention, Institute of Biosciences & Technology, Texas A&M University. Her long-term goal is to elucidate the molecular basis of epigenetic changes in the human genome and to develop novel therapies by targeting aberrant DNA methylation and demethylation associated with human diseases, including cancer, immunoinflammatory and cardiovascular diseases.
Dr. Huang's laboratory is focused on elucidating the physiological and pathophysiological functions of TET2 protein and its 5-methylcytosine oxidation products (5hmC, 5fC and 5caC) in cancer and development (Nature Genet 2014; Trends in Genetics 2014).",Associate Professor,Institute of Biosciences and Technology,https://scholars.library.tamu.edu/vivo/display/nd7ed0926
Zachary,Adelman,Professor,,Associate Professor,Entomology,https://scholars.library.tamu.edu/vivo/display/ndc81a8e5
Hays,Rye,Associate Professor,"A fundamental principle of biology is the use of chemical energy in the form of ATP to assemble, disassemble and alter macromolecular structure. Specialized control proteins known as molecular chaperones are often responsible for this activity and have been recognized in recent years to be essential for regulating many aspects of cellular biology. Using a variety of biophysical and biochemical techniques, the Rye lab focuses on three fundamental cellular processes that require molecular chaperones: (1) protein folding (2) protein disaggregation and (3) vesicle trafficking. In each of these cases, large quantities ATP are burned, resulting in molecular organization in the case of protein folding, and molecular disassembly and remodeling in the case of protein disaggregation and vesicle trafficking. We are interested in understanding the detailed biophysical mechanisms that underpin these events. Why are these processes so energetically expensive? Are there any similarities in how the energy is used between these very different molecular processes? Are there general principles of energy transduction in biology that can be gleaned by comparing these examples with other molecular machines, such as cytoskeletal motors? Understanding how molecular chaperones control protein and membrane organization will provide key insights into not only basic cell biology, but will also illuminate aspects of many diseases that spring from aberrant protein and membrane dynamics.",Associate Professor,Biochemistry and Biophysics,https://scholars.library.tamu.edu/vivo/display/ne7fb85e1
James,Erickson,Associate Professor,"Alternative developmental fates are often determined by small differences in the concentrations of signaling molecules. In many cases, cells respond to these signals within narrowly defined temporal windows and are unresponsive to the same signal molecules at other times in development. A number of aspects of Drosophila sex determination make it an ideal experimental system to study how strict temporal controls and small quantitative differences in protein concentration can elicit different developmental fates.",Associate Professor,Biology,https://scholars.library.tamu.edu/vivo/display/nf4575bc8