First name,Last name,Preferred title,Overview,Position,Department,Individual
Zhilong,Yang,Associate Professor,"The overarching research goal of the Yang laboratory is to understand the mechanisms governing viral replication, with the rationale that the discoveries will expand the knowledge of both viruses and their hosts, and facilitate the development of novel strategies to combat viral and non-viral diseases. A parallel goal of Yang lab is to provide a highly supportive environment to train the next generations of scientists. The ongoing research focuses on how viruses interact with two cellular housekeeping processes: protein synthesis and metabolism using vaccinia virus as the research model. Vaccinia virus is the prototype poxvirus. Poxviruses significantly impact public health, with many presently causing morbidity and mortality in humans and many economically important animals, including deadly zoonotic pathogens (e.g., monkeypox virus). In addition, despite the eradication of smallpox, one of the most (if not the most) devastating diseases in human history, smallpox resurgence remains a serious biothreat. Poxviruses are also widely developed as veterinary and human vaccine vectors and as cancer treatment agents. Poxviruses provide numerous precious tools to understand many aspects of cell biology and dissect complex life processes, as their large DNA genomes encode hundreds of genes that engage many key nodes of cellular life. Yang's research integrates biochemical, molecular, and omics approaches. Taking advantage of their in-depth knowledge of the poxvirus replication and virus-host interactions, the Yang lab also develops vaccinia virus-based utilities and anti-virals.",Associate Professor,Veterinary Pathobiology,https://scholars.library.tamu.edu/vivo/display/n02daa01b
Christopher,Seabury,Associate Professor,"Mammalian molecular genetics, genomics, and population genetics; animal disease genomics; utilization of population and quantitative genetics to elucidate host loci and relevant variation influencing differential susceptibility to disease, adaptability, and feed efficiency; next generation sequencing and de novo genome assembly as a mechanism to enable novel research programs in non-model mammalian and avian species of interest.",Associate Professor,Veterinary Pathobiology,https://scholars.library.tamu.edu/vivo/display/n08037241
Yi,Xu,Associate Professor,"Our current research activities focus on understanding the pathogenic mechanism of Streptococcus gallolyticus subsp. gallolyticus (Sgg). Sgg is a gram-positive opportunistic pathogen that causes life-threatening bacteremia and infective endocarditis (IE). It is also strongly associated with colorectal cancer (CRC). My lab was the first to demonstrate that Sgg actively promotes the development of colon tumors, elevating a long-stranding clinical association to a functional causal role of Sgg in tumor development. Despite its medical importance, the pathogenic mechanism of Sgg remains poorly understood. Our recent studies have demonstrated that a type VII secretion system of Sgg plays a key role in pathogenesis. Currently we are interested in understanding the mechanism underlying following key steps in Sgg pathogenesis: 1) colonization of the intestinal epithelium, 2) modulation of intestinal homeostasis in normal and tumor-bearing colons, and 3) dissemination from the gastrointestinal tract to the circulatory system.
Keywords: bacterial pathogenesis, infectious diseases, virulence, colorectal cancer, microbiome, microbiota, type VII secretion system, gastrointestinal tract",Associate Professor,Institute of Biosciences and Technology,https://scholars.library.tamu.edu/vivo/display/n0c22439a
Carlos,Avila,Associate Professor,,Associate Professor||Associate Professor,Texas A&M AgriLife Research||Weslaco Research and Extension Center,https://scholars.library.tamu.edu/vivo/display/n0cb2ddef
Timothy,Devarenne,Associate Professor,"We study the biochemical and molecular mechanisms underlying the control of programmed cell death (PCD) in plants and how PCD is manipulated during plant-pathogen interactions. Specifically we study the interaction between tomato and Pseudomonas syringae pv. tomato (Pst) the causative agent of bacterial spot disease. Resistance to this disease is conferred by the host Pto serine/threonine protein kinase which recognizes Pst strains expressing the type III effector protein AvrPto.
PCD is induced during both resistant and susceptible plant-pathogen interactions. In the case of a resistant interaction, PCD induced by the plant, known as the hypersensitive response (HR), and acts to limit the spread of the pathogen. In susceptible plant-pathogen interactions plant PCD is induced by the pathogen after infection leading to death of the host. Studies have indicated that the genes controlling host PCD during the HR are the same genes that are manipulated by the pathogen during susceptible interactions. The difference lies in the timing of controlling the activity of these genes; HR PCD occurs within 12 hours of pathogen recognition while pathogen-induced PCD occurs several days after infection.
Many of these genes that control plant PCD are serine/threonine (S/T) protein kinase. We are interested in studying a specific class of S/T protein kinases that control PCD in plants called AGC kinases and how they are regulated in both resistant and susceptible plant-pathogen interactions. Additionally, when plants are not attacked by pathogens, PCD is a process that requires constant control so that cell death does not occur. We are looking at the signaling mechanisms and pathways employed to keep PCD under check in non-pathogen challenged plants.",Faculty Affiliate||Associate Professor,Energy Institute||Biochemistry and Biophysics,https://scholars.library.tamu.edu/vivo/display/n11411275
Rodolfo,Aramayo,Associate Professor,"My current research primarily focuses on understanding the organization, distribution, and comparison of information in Biological Systems. Our work encompasses two key levels of investigation:
Molecular Genetics: We employ the filamentous fungus Neurospora crassa as a model organism to uncover and comprehend the intricate molecular components responsible for sequence-based comparisons between homologous chromosomes, leading to the initiation of Meiotic Silencing, a phenomenon driven by RNA-mediated processes. Currently, our primary focus centers on the exploration of whether genes recognized for their significance in Meiotic Transvection/Silencing also contribute to the occurrence of Repeat Induced Point Mutation (RIP) phenomena.
Computational Analysis: We are developing novel computational pipelines dedicated to detecting sequence variations within related genomes. We are particularly intrigued by the prospect of simplifying (i.e., digitizing) the information present in DNA, RNA, and Proteins so as to simplify its manipulation and analysis. We think that digitizing emerging genomic data will not only enable us to use this data effectively but also to integrate it into Artificial Intelligence, Data Clustering, and Image Recognition Algorithms, in ways not done before. We posit that this process of converting biological features into digital equivalents has the potential to simplify genomic information, making it easier to uncover previously unnoticed patterns through complex computational comparisons. This approach has already yielded promising results by revealing unexpected informational patterns across various organisms' chromosomes. We believe that it will streamline and enhance our ability to comprehend different cellular and organismal states. Moreover, it holds significant promise in revolutionizing our understanding of diseases, particularly Cancer and Metagenomics. This informational perspective also contributes to our comprehension of genome evolution, especially in the field of comparative genomics and microbial metagenomics.",Associate Professor,Biology,https://scholars.library.tamu.edu/vivo/display/n14287b36
Donald,Brightsmith,Associate Professor,"My research focuses on the conservation, ecology, health, and welfare of parrots and their relatives in both the wild and captivity.",Professor||Associate Professor,Veterinary Pathobiology||Veterinary Pathobiology,https://scholars.library.tamu.edu/vivo/display/n19a331cf
Michael,Golding,Associate Professor,,Associate Professor,Veterinary Physiology and Pharmacology,https://scholars.library.tamu.edu/vivo/display/n19ac3c74
Tatyana,Igumenova,,"My laboratory is broadly interested in understanding the structural basis of signal transduction events that occur at the membrane surface. These events are mediated by signaling proteins that reversibly associate with membranes in response to binding second messengers, such as Ca2+ ions, diacylglycerol, and phosphoinositides. One of the key kinases regulating these signal transduction pathways is the Protein Kinase C (PKC) family. Aberrant levels of PKC expression or activity have been implicated in a large number of human diseases, such as cancer, cardiac failure, Alzheimer's disease, and diabetes. Despite the significance of PKC in signal transduction and human health, the structural and dynamical basis of its activation upon binding to lipid membranes remains elusive.",Associate Professor,Biochemistry and Biophysics,https://scholars.library.tamu.edu/vivo/display/n1c6e6632
Xiuren,Zhang,Professor,"Our laboratory focuses on systemic analysis of biochemical, molecular and biological functions of AGO family proteins (AGOs-mics) in genetically tractable Arabidopsis and economically important crops (i.e. rice). We'd like to identify the small RNAs, mRNA targets and protein components which associate with these AGOs. We will study protein/RNA and protein/protein interactions in these RISC assembly events. Our goal is to understand how these AGOs are functionally specialized or redundant corresponding to endogenous development cues and external environmental stimuli. Particularly, we'd like to learn how plants reprogram their gene expression through the small RNAs and AGOs to construct a new cellular niche in responses to environmental challenges and biotic stresses.
Another aspect of our research involves host/virus interaction. Plants take advantage of RNA silencing pathways to defend themselves from exogenous nucleic acid invaders (i.e. viruses). As an anti-host defense mechanism, viruses encode suppressors that can block RNA silencing responses. We have recently demonstrated that CMV 2b disables AGO1 cleavage activity to inhibit RNA silencing and to counter host defense. We are now extending our study to suppressors of several other viruses and the molecular mechanisms of their suppression.",Associate Professor,Biochemistry and Biophysics,https://scholars.library.tamu.edu/vivo/display/n220933ad
Maria Isabel,Vales,Associate Professor,"Dr. Vales leads the Texas A&M Potato Breeding and Variety Development Program. The goal of the Program is to develop high yielding potato varieties, mainly for the fresh and chipping markets, adapted to Texas growing conditions. She combines conventional and molecular tools to enhance the efficiency of potato breeding efforts and to maximize genetic gains from selection.",Associate Professor,Horticultural Sciences,https://scholars.library.tamu.edu/vivo/display/n3dc104cf
Alistair,McGregor,Associate Professor,"Our lab studies various herpesviruses but the major focus of our research is on the study of cytomegalovirus (CMV) which is a common pathogen that establish a life long infection in a mainly latent state. CMV causes disease in transplant patients and is a leading cause of congenital disease in newborns where the virus crosses the placenta and infects the fetus in utero. Congenitally infected newborns can have severe disease that causes cognitive impairment, hearing loss and vision problems. There is no vaccine against congenital CMV and our research seeks to understand the disease and develop interventions strategies.",Associate Professor,Microbial Pathogenesis and Immunology,https://scholars.library.tamu.edu/vivo/display/n3de7f8e8
Karl,Aufderheide,Emeritus Associate Professor,"Cell/Developmental Biology. Developmental Genetics. Intracellular differentiation of eukaryotes, especially ciliates. General interests in: intracellular pattern formation and morphogenesis; molecular aspects of gene expression in ciliate protozoa; development of organelles, including intracellular motility and organelle localization. Specific interests in: signal transduction, regulation of cytoskeletal organization, and motility in the social amoeba Dictyostelium; organization, patterning and morphogenesis of surface-related cytoskeletal and membranous structures of ciliates, especially Paramecium; applications of laser optical force trap technology to developmental problems in Paramecium tetraurelia and Tetrahymena thermophila; 2 molecular aspects of serotype gene expression in P. tetraurelia; development of exocytotic organelles (the trichocysts) in P. tetraurelia. General approach involves use of classical and modern light and electron microscopic techniques, integrated with genetic, molecular, mechanical or physiological manipulations of the cells.",Associate Professor,Biology,https://scholars.library.tamu.edu/vivo/display/n3ed65e09
Ryang,Lee,Associate Professor,"Our group specializes in determining the cellular and molecular mechanisms of beneficial effects of mesenchymal stem cells (MSCs) in diseases that include heart disease, diabetes, and peritonitis. The goal is to develop a cellular therapy for human diseases either (a) with adult stem/progenitor cells (MSCs), or (b) with therapeutic factors that MSCs produce in response to signals from injured tissues.",Associate Professor,Cell Biology and Genetics,https://scholars.library.tamu.edu/vivo/display/n3ffcdcc1
Michelle,Lawing,Associate Professor,"Dr. Lawing is an Associate Professor in the Department of Ecology and Conservation Biology. She is primarily interested in using methods and models from modern ecology and evolutionary biology combined with evidence from the fossil record to inform our understanding of how species and communities respond to environmental change through time. Her work includes the investigation of geographic, evolutionary, and morphological responses of species and communities to environmental changes in the Late Pleistocene and throughout the Miocene to present. She is involved in developing species distribution models (SDM), geometric morphometric methods (GMM), and phylogenetic comparative methods (PCM). Before becoming an Assistant Professor, Dr. Lawing was a postdoctoral fellow at the National Institute for Mathematical and Biological Synthesis (NIMBioS). She earned a PhD double major in Evolution, Ecology, and Behavior and in Geological Sciences from Indiana University, Bloomington.",Associate Professor,Ecology and Conservation Biology,https://scholars.library.tamu.edu/vivo/display/n4d1c74b5
Scott,Dindot,Associate Professor,,Associate Professor,Veterinary Pathobiology,https://scholars.library.tamu.edu/vivo/display/n5a986b57
Jaime,Alvarado-Bremer,Professor,,Associate Professor||Professor,"Rangeland, Wildlife and Fisheries Management||Wildlife and Fisheries Sciences||Marine Biology",https://scholars.library.tamu.edu/vivo/display/n5b437859
Kevin,Myles,Professor,,Associate Professor,Entomology,https://scholars.library.tamu.edu/vivo/display/n5d73717b
Jason,Gill,Associate Professor,"Dr. Gill's major research focus is the biology and application of the viruses of bacteria, called bacteriophages or simply phages. Phages are the most abundant organisms on Earth, and they are found ubiquitously in water, soil, and as part of the microbial flora of animals and plants. As natural predators of bacteria, phages are attractive agents for the control of pathogenic bacteria in humans, animals, and foods. The increasing prevalence of antibiotic resistance in pathogenic bacteria, and the desire to curtail use of antibiotics in animal agriculture, has sparked interest in the use of phages as antimicrobials. Research in Dr. Gill's lab encompasses phage genomics, basic phage biology and the applications of phages in real-world settings.",Associate Professor,Animal Science,https://scholars.library.tamu.edu/vivo/display/n6277ae7f
Allen,Honeyman,Associate Professor,,Associate Professor,Biomedical Sciences,https://scholars.library.tamu.edu/vivo/display/n62788a8f
Gary,Kunkel,Associate Professor,"An important step to control the amount of RNA or protein in particular types of cells is at the level of transcription of genes. Our lab studies a multifunctional vertebrate transcriptional activator protein known as SBF/Staf/ZNF143. This protein binds to SPH sites within promoters of many genes that produce small stable RNAs (e.g., snRNAs and others) PLUS probably over 2000 promoters of genes that produce mRNAs. Two separate activation domains in this protein direct its action at small RNA vs. mRNA gene promoters. We are using zebrafish as a vertebrate model organism to study the roles of SBF/Staf during development. In vivo studies are coupled with biochemical and molecular biology methods to decipher the mechanisms by which this protein stimulates transcription of various types of genes.",Associate Professor,Biochemistry and Biophysics,https://scholars.library.tamu.edu/vivo/display/n638b96b2
Maria,Miglietta,Associate Professor,,Associate Professor,Marine Biology,https://scholars.library.tamu.edu/vivo/display/n63b0d1d8
Jessica,Labonte,Associate Professor,,Associate Professor,Marine Biology,https://scholars.library.tamu.edu/vivo/display/n6ba4cec9
Gary,Odvody,Associate Professor,"Major diseases (pathogens) occurring on sorghum and maize. These include: charcoal rot (Macrophomina phaseolina), sorghum downy mildew (Peronosclerospora sorghi), head smut (Sporisorium reilianum), aflatoxin (Aspergillus flavus), several foliar diseases, sorghum ergot (Claviceps africana) and grain mold (Fusarium moniliforme and F. thapsina).
Research areas for pathogens include ecology, survival, initial inoculum, pathogen variability, and host:parasite interaction (especially under stress environments). Part of a large interdisciplinary sorghum improvement team at Texas A&M that is active globally through INTSORMIL research activities.",Associate Professor||Associate Professor,Corpus Christi Research and Extension Center||Plant Pathology and Microbiology,https://scholars.library.tamu.edu/vivo/display/n6f440d68
Junjie,Zhang,Associate Professor,"The living cell contains a collection of molecular machines to grow and function. These machines include the ribosomes, the chaperons, the proteasomes and other enzymes. Malfunction of these machines, if occurred in human, are related to many diseases. Understanding their three-dimensional (3D) structures is essential to understand how these machines work in the cell and eventually to treat those related diseases.
Here we use an experimental technique called cryo-electron microscopy (cryo-EM) to image these cellular machines in their native environment at liquid nitrogen temperatures. We then use image processing and graphics techniques to visualize their 3D structures, answering the questions such as how they assemble and how they interact with each other.
In addition, we develop computational modeling tools to interpret and animate these obtained 3D structures to further describe their movements and dynamics.",Associate Professor,Biochemistry and Biophysics,https://scholars.library.tamu.edu/vivo/display/n701e163f
Endang,Septiningsih,Associate Professor,"My current research focus is plant genetics, genomics, and gene editing, with an emphasis on rice and several other crops. This covers various traits, including abiotic and biotic stresses, grain quality, yield and important agronomic traits that are important to Texas and the rest of the world. Different sources of genetic donors, including exotic germplasm will be used to increase the diversity of research material. Local, national and international research collaborations will be pursued to accelerate progress for crop improvement and broaden the research impacts.",Associate Professor,Soil and Crop Sciences,https://scholars.library.tamu.edu/vivo/display/n74b30548
Xu,Peng,Associate Professor,"Our long-term goal is to explore and define novel genetic mechanisms that are involved in cardiovascular disease which can ultimately translate into potential strategies for its treatment. To achieve this goal, we will use a comprehensive approach including mouse genetics and molecular and cellular biology methods to explore the mechanisms involved in the regulation of cardiovascular development and disease.",Associate Professor,Medical Physiology,https://scholars.library.tamu.edu/vivo/display/n78b50f7c
Carol,Loopstra,Associate Professor,,Associate Professor,Ecology and Conservation Biology,https://scholars.library.tamu.edu/vivo/display/n7a948193
Yanan,Tian,Associate Professor,Transcriptional control of the Ah receptor-regulated gene expression. Interaction between the Ah receptor and NF-kB signal transduction pathways. lncRNAs and their role in regulation of gene expression,Associate Professor,Veterinary Physiology and Pharmacology,https://scholars.library.tamu.edu/vivo/display/n7f54d80b
Jay,Groppe,Associate Professor,,Associate Professor,Biomedical Sciences,https://scholars.library.tamu.edu/vivo/display/n93572b3e
Fei,Liu,Associate Professor,"Our laboratory conducts research in:
1. The characterization and application of standardized mesenchymal stem cells (MSCs) derived from iPS cells and their extracellular vesicles (EVs). Current application focuses on treating diseases caused by over-activation of immune system, such as Sjogren's syndrome, an autoimmune disease causing dry eyes and dry mouth, and cytokine storm caused by infections.
2. Roles of tissue-resident macrophages in the development, homeostasis, and regeneration of salivary glands damaged by radiation therapy for cancer.",Associate Professor,Cell Biology and Genetics,https://scholars.library.tamu.edu/vivo/display/n9732f08e
Susan,Payne,Associate Professor,"Molecular aspects of viral replication, pathogenesis, and evolution. The major focus of the laboratory is the retrovirus, equine infectious anemia virus. EIAV studies include evolution of virulence during rapid virus passage, modification of cell signaling pathways mediated by viral glycoproteins, effects of proinflammatory cytokines on virus replication and disease, and detailed mapping of EIAV virulence determinants. We also study the recently discovered avian bornavirus, etiological agent of proventricular dilatation disease of parrots, in conjunction with colleagues from the Schubot center.",Associate Professor,Veterinary Pathobiology,https://scholars.library.tamu.edu/vivo/display/n97844057
Hung-Jen,Wu,Associate Professor,"Dr. Wu uses nanostructured materials and analytical tools to develop diagnostic techniques for medical applications. His laboratory recently focuses on understanding the influences of multivalency and cell membrane environment on pathogen-host cell recognition. The applications of his techniques include, infectious diseases screening, exploring cell membrane function, and targeted drug delivery.",Associate Professor,Chemical Engineering,https://scholars.library.tamu.edu/vivo/display/n9cbcca3e
Mendell,Rimer,Associate Professor,"Research in our lab centers on the molecular and cellular mechanisms underlying the formation, maintenance and pathology of synapses, the connections between nerve cells and their targets. Because of its simplicity and experimental accessibility we have used the vertebrate neuromuscular junction (NMJ) as our model system. The NMJ is the synapse between a motor neuron and a skeletal muscle fiber. We address these problems using state-of-the-art mouse molecular genetic techniques in combination with standard molecular, cellular, and immunological approaches.",Associate Professor,Neuroscience and Experimental Therapeutics,https://scholars.library.tamu.edu/vivo/display/na1f9d3fe
Qingyi,Yu,Associate Professor,"My main research interest is to apply genomics and molecular genetics to crop improvement. Current research topics include genomics of abiotic stress tolerance in warm-season turfgrass, gene regulatory networks underlying CAM photosynthesis in pineapple, and sex chromosome evolution in Caricaceae.",Associate Professor,Texas A&M AgriLife Research,https://scholars.library.tamu.edu/vivo/display/naa660c01
Penny,Riggs,"Associate Professor, Animal Science",,Adjunct Associate Professor||Associate Professor,Veterinary Integrative Biosciences||Animal Science,https://scholars.library.tamu.edu/vivo/display/nab0c8ffe
Kranthi,Mandadi,Associate Professor,"World-wide, pathogens, insects and abiotic stresses cause major losses to agricultural production and productivity. Our lab employs integrated approaches for basic and translational studies of crop stress responses in model and crops. We are using the latest genomics, genetics, and bioinformatics tools to study plant stress responses to diverse plant biotic and abiotic stress conditions, as well as enhance their stress tolerance using biotechnology and breeding tools.",Associate Professor||Associate Professor,Plant Pathology and Microbiology||Texas A&M AgriLife Research,https://scholars.library.tamu.edu/vivo/display/nb05fab89
Sang Jin,Suh,Associate Professor,"There are several research foci in the Suh laboratory. First, we are interested in elucidating and understanding the molecular mechanisms involved in the survival of pathogenic bacteria in nature and the contribution of these mechanisms to aid these pathogens in their ability to cause human diseases.
Second, we are interested in developing peptide based biosensors for rapid detection of important bacterial pathogens. Our biosensors can detect pathogens in just minutes rather than hours or days of other approaches. Third, we are interested in genetic and metabolic engineering to develop bacterial cells into microbial factory for optimal production of value-added products.",Associate Professor,Biomedical Sciences,https://scholars.library.tamu.edu/vivo/display/nb2c8b3d4
Mariana,Mateos,Associate Professor,,Associate Professor,"Rangeland, Wildlife and Fisheries Management||Wildlife and Fisheries Sciences",https://scholars.library.tamu.edu/vivo/display/nb7331dd1
Lin,Zhu,Associate Professor,,Associate Professor,Irma Lerma Rangel School of Pharmacy,https://scholars.library.tamu.edu/vivo/display/nb936a5d7
Raquel,Sitcheran,Associate Professor,"The goal of our research is to understand the molecular mechanisms that control NF-kappaB regulatory networks in the central nervous system (CNS). NF-kappaB is a ubiquitously expressed, evolutionarily conserved transcription factor that responds to a variety of signals and regulates fundamental processes, including cell growth and proliferation, inflammation, invasion and angiogenesis. Indeed, aberrant NF-kappaB activity or expression is associated with many cancers, as it can promote tumorigenesis, tumor progression and resistance to therapy. Our focus is on glioblastoma, a common and highly lethal CNS tumor that is very resistant to current treatment strategies.",Associate Professor,The Texas A&M University System,https://scholars.library.tamu.edu/vivo/display/nb97a02a1
Peter,Nghiem,Associate Professor,"Molecular, cellular, and phenotypic characterization of the canine models for Duchenne muscular dystrophy (golden retriever muscular dystrophy [GRMD]; german short-haired pointer muscular dystrophy [GSHPMD]; cavalier king charles spaniel muscular dystrophy). Molecular characterization with genome-wide mRNA and microRNA profiling via Affymetrix chip and proteomic profiling with mass spectrometry. Confirmation of molecular targets with qRT-PCR, western blot, immunofluorescence microscopy, etc. Cellular characterization of the canine models utilizing biopsy extracted muscle stem cells (myoblasts), including evaluation of the molecular and phenotypic effects of various treatments. Phenotypic characterization of the canine models using internationally established functional outcome measures developed in the Kornegay laboratory. Current research focus is on preclinical drug trials, including gene therapy (dystrophin gene replacement) via adeno-associated viral vector delivery; utilzing gene editing techniques such as CRISPR/Cas9 and TALENs for treatments of genetic disease; characterization of genetic modifiers via whole-genome next generation sequencing (discovery approach); and evaluation of muscle metabolism in dystrophin deficiency.",Associate Professor,Veterinary Integrative Biosciences,https://scholars.library.tamu.edu/vivo/display/nc223f624
Sakiko,Okumoto,Associate Professor,"The overall goal of my research is to understand how nitrogen (N), quantitatively the most important nutrient in crops, is managed in plants. Specifically, my research aims at how amino acids, one of the main forms of organic N in plant body, is transported. In order to study such mechanisms in detail, we have developed protein-based, fluorescent sensors that allow us to track amino acids in live cells. We utilize these sensors to discover novel molecular mechanisms that are involved in the regulation of amino acids. We are currently interrogating the processes in which amino acid exporters are involved in, using various genetic resources such as T-DNA insertion mutants and gene editing tools. We are also interested in developing novel sensors for other biologically important molecules.",Associate Professor,Soil and Crop Sciences,https://scholars.library.tamu.edu/vivo/display/nc97dd3d8
Zhilei,Chen,Associate Professor,"The Chen Medicinal Protein Lab aims to accelerate the discovery, development and clinical translation of protein therapeutics through innovative protein engineering research. We believe that better medicine enables a higher quality of living, and protein engineers are charged to create the better medicine for today and tomorrow. We are particularly interested in the creation and engineering of affordable protein therapeutics to prevent and treat infectious diseases and cancer.",Associate Professor,Microbial Pathogenesis and Immunology,https://scholars.library.tamu.edu/vivo/display/nc9a6c3ae
Oscar,Riera-Lizarazu,Associate Professor,"I work on developing and using biocomputational and genomics tools for polyploid genetic analysis with the goal of applying such tools to increase breeding efficiency and contribute to a better understanding of the genetic basis of rose adaptation, plant architecture, growth habit, and phenology.",Associate Professor,Horticultural Sciences,https://scholars.library.tamu.edu/vivo/display/nccc294be
Paul,Brandt,Associate Professor,"Understanding how the target cells ""interpret"" hormonal signals is the primary focus of our laboratory.Most of our research centers on regulation of steroid hormone-transduced signals. One area of study is the calcium-dependent regulation of glucocorticoid and androgen receptor-mediated transcription. A second major area of interest concerns glucocorticoid and steroid sex hormone regulation of nitric oxide (NO) production. Other areas of interest in our laboratory are: development of androgen-independence in prostate cancer; stress responses in PMCA1(-) cell lines; and the involvement of NO in dry eye syndrome.",Associate Dean for Academic Technology and Curriculum Innovation||Associate Professor,Neuroscience and Experimental Therapeutics||School of Medicine,https://scholars.library.tamu.edu/vivo/display/nd24a6df6
Lawrence,Griffing,Associate Professor,"I am testing the theory that the endoplasmic reticulum, ER is the circulatory network of the cell, connecting different organelles to each other, allowing them to share signals, lipids, and proteins.
I am particularly interested in how the cytoskeletal system of plants regulates the movement of the ER network. In interphase, the actinomyosin network drives movement of the ER, just as it drives the movement organelles through the cytoplasm in a process called cytoplasmic streaming, a phenomenon in plants, but not animal cells. Of the seventeen different myosin forms in plants, only six are involved in active cytoplasmic streaming. We are sorting out which of those six guide the different movements of the endoplasmic reticulum.
I am also interested in the nature of the nexus between the ER and other organelles, including the chloroplast, plasma membrane, and Golgi. I have recently shown that by photo-stimulating the nexus between the chloroplast and the ER, the directional flow within the ER can be reversibly altered. This ability to generate very localized ER stress may have application in a wide variety of fields - from finding cures for neurodegenerative diseases such as Alzheimer's syndrome to developing crops that can better-tolerate physiological heat stress and drought.
Finally, I recently founded the company, Griffing Biologics LLC, which is based on the discovery of a novel, non-toxic pre-emergent herbicide that interferes with plant sterol metabolism. Other work examining the uptake of sterols indicates that it may get into the plant cells via plasma membrane-ER contact sites. We are pursuing the function of this transport in controlling the early stages of plant growth.",Associate Professor,Biology,https://scholars.library.tamu.edu/vivo/display/nd558069a
Amy,Glass,Associate Professor,,Associate Professor,Economics,https://scholars.library.tamu.edu/vivo/display/nd699e201
Yun,Huang,Associate Professor,"Dr. Huang is currently an Assistant Professor at the Center for Epigenetics and Disease Prevention, Institute of Biosciences & Technology, Texas A&M University. Her long-term goal is to elucidate the molecular basis of epigenetic changes in the human genome and to develop novel therapies by targeting aberrant DNA methylation and demethylation associated with human diseases, including cancer, immunoinflammatory and cardiovascular diseases.
Dr. Huang's laboratory is focused on elucidating the physiological and pathophysiological functions of TET2 protein and its 5-methylcytosine oxidation products (5hmC, 5fC and 5caC) in cancer and development (Nature Genet 2014; Trends in Genetics 2014).",Associate Professor,Institute of Biosciences and Technology,https://scholars.library.tamu.edu/vivo/display/nd7ed0926
Alan,Pepper,Associate Professor,"My laboratory uses genetic, molecular, and genomic tools to study how terrestrial plants adapt, both in a short-term sense (phenotypic plasticity) and in a long-term sense (adaptive evolution), to the vast diversity of environments found on our planet.
My laboratory is studying the molecular and physiological mechanisms of 'downstream' developmental responses to light using genetic and molecular tools available in the model plant Arabidopsis thaliana. In another project, we are using comparative genomics to investigate the genetic basis of the evolution-under-domestication of developmental processes in cultivated cottons (Gossypium spp.) and their wild relatives. Gossypium is in the Malvaceae family and, as such, shares a recent common ancestor with Arabidopsis and other plants in the Brassicaceae family.
We are also investigating the genetic mechanisms of plant adaptation to the stresses of extreme environments such as drought, low mineral nutrients (N,P,K) and heavy metals, in wild relatives of Arabidopsis, such as the rare endemic plant Caulanthus amplexicaulis (Brassicaceae.) This work has led us to become more broadly interested in the conservation and ecological genetics of rare plants, particularly geoendemics.",Associate Professor,Biology,https://scholars.library.tamu.edu/vivo/display/ndc106a4d
Zachary,Adelman,Professor,,Associate Professor,Entomology,https://scholars.library.tamu.edu/vivo/display/ndc81a8e5
Deborah,Siegele,Associate Professor,"Phenotypes are observable characteristics of an organism that result from the expression of a particular genotype in a particular environment. Examples of phenotypic traits in microbes are motility, sporulation, ability to perform anaerobic respiration, and resistance/sensitivity to an antibiotic.
Until recently, phenotypic information has been captured as free text descriptions in research papers. Ambiguities in natural language confound attempts to retrieve information across sources. For example, ""serotype"" and ""serovar"" both refer to the same phenotype, but a simple text-based query with either word alone would miss the other. Or a single term, such as ""sporulation"" is used to refer to multiple, distinct processes in different organisms. Issues such as these hamper the ability to integrate different phenotypic data sets for the same organism or to use phenotypic information in one organism to predict possible phenotypes in another organism. Ideally, phenotype information should be stored in a consistent, computable format for ease of data integration and mining.
Controlled vocabularies are used to provide both consistent terminology and a structured data format for the capture of biological information. Ontologies are controlled vocabularies of defined terms with unique identifiers and precise relationships to each other. There are phenotype ontologies available for many eukaryotic organisms, including fungi. However, when the OMP project was initiated, none of the existing ontologies was appropriate to comprehensively capture phenotypes for Bacteria or Archaea or to enable comparisons across microbial taxa.
The Siegele lab and our collaborators at TAMU and the Univ. of Maryland (IGS) are developing a formal Ontology of Microbial Phenotypes (OMP). Our lab is focused on term development and annotating microbial phenotypes. OMP can be accessed at microbialphenotypes.org. Releases of OMP are available at github.com/microbialphenotypes.",Associate Professor,Biology,https://scholars.library.tamu.edu/vivo/display/ne333d587
Scott,Finlayson,Associate Professor,"The main focus of my research program is investigating the roles of environmental signals as conditioners of plant growth and development, and discovering the mechanisms through which they work. Current research interests include defining the pathways and mechanisms associated with the regulation of branch development by light signals (and other signals), using both crop and model species. I also have a broad interest in how phytohormones participate in the regulation of growth and development and stress responses.",Associate Professor,Soil and Crop Sciences,https://scholars.library.tamu.edu/vivo/display/ne6245565
Hays,Rye,Associate Professor,"A fundamental principle of biology is the use of chemical energy in the form of ATP to assemble, disassemble and alter macromolecular structure. Specialized control proteins known as molecular chaperones are often responsible for this activity and have been recognized in recent years to be essential for regulating many aspects of cellular biology. Using a variety of biophysical and biochemical techniques, the Rye lab focuses on three fundamental cellular processes that require molecular chaperones: (1) protein folding (2) protein disaggregation and (3) vesicle trafficking. In each of these cases, large quantities ATP are burned, resulting in molecular organization in the case of protein folding, and molecular disassembly and remodeling in the case of protein disaggregation and vesicle trafficking. We are interested in understanding the detailed biophysical mechanisms that underpin these events. Why are these processes so energetically expensive? Are there any similarities in how the energy is used between these very different molecular processes? Are there general principles of energy transduction in biology that can be gleaned by comparing these examples with other molecular machines, such as cytoskeletal motors? Understanding how molecular chaperones control protein and membrane organization will provide key insights into not only basic cell biology, but will also illuminate aspects of many diseases that spring from aberrant protein and membrane dynamics.",Associate Professor,Biochemistry and Biophysics,https://scholars.library.tamu.edu/vivo/display/ne7fb85e1
Carl,Gregory,Associate Professor,"Our lab has been examining the biology of MSCs with a view to developing rapid molecular markers and tests for evaluating/purifying maximally efficacious cultures of MSCs. The group also specializes in bone repair by MSCs. Based on detailed characterization of the molecular mechanism of osteoblast differentiation by MSCs, a novel and effective bone regeneration strategy has been developed. Additionally, we are currently examining the effects of various small molecules and immunological strategies for the safe and effective inhibition of Dkk-1 activity in bone tumors.We have recently established methods to model bone-tumor interactions using bioreactors that simulate microgravity.",Associate Professor,Cell Biology and Genetics,https://scholars.library.tamu.edu/vivo/display/ne92fd9fb
Jessica,Light,Associate Professor,,Associate Professor,"Rangeland, Wildlife and Fisheries Management||Wildlife and Fisheries Sciences",https://scholars.library.tamu.edu/vivo/display/nef845312
Hojun,Song,Associate Professor,"The Song Lab focuses on the study of an insect order Orthoptera (grasshoppers, crickets, and katydids) and other insects and aims at understanding behavioral, ecological, physiological, morphological and molecular evolution in a phylogenetic framework.",Associate Professor,Entomology,https://scholars.library.tamu.edu/vivo/display/nf14bbe4a
James,Erickson,Associate Professor,"Alternative developmental fates are often determined by small differences in the concentrations of signaling molecules. In many cases, cells respond to these signals within narrowly defined temporal windows and are unresponsive to the same signal molecules at other times in development. A number of aspects of Drosophila sex determination make it an ideal experimental system to study how strict temporal controls and small quantitative differences in protein concentration can elicit different developmental fates.",Associate Professor,Biology,https://scholars.library.tamu.edu/vivo/display/nf4575bc8
Kevin,Conway,Associate Professor,"The central goal of the TAMU Systematic Ichthyology Laboratory is to document the taxonomic, anatomical, ontogenetic, and genetic diversity of teleost fishes. Teleost fishes are without-a-doubt the most successful group of fishes (and probably vertebrates) on the planet currently and have colonized almost all available aquatic habitats (and even some terrestrial habitats). The morphological diversity of teleosts is unparalleled by any other group of vertebrates, ranging in size from tiny 7mm long minnows to 10meter long oar fish, and in shape from ribbon-like eels to globe-like pufferfishes. We investigate this diversity not only to further our understanding of vertebrate anatomy in general but also to discover novel characters to advance our understanding of the phylogenetic relationships of select groups of teleost fishes. Our investigations frequently lead to the discovery of previously unrecognized taxonomic diversity and one of the broader aims of the TAMU Systematic Ichthyology Laboratory is to document this diversity through the description of new species.",Associate Professor,Ecology and Conservation Biology,https://scholars.library.tamu.edu/vivo/display/nfaafc469